Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Pds5bQ4VA53 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Pds5bQ4VA53 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC32.03■■■□□ 2.72
Pds5bQ4VA53 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Pds5bQ4VA53 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Pds5bQ4VA53 Gm7638-201ENSMUST00000121348 967 ntBASIC32.03■■■□□ 2.72
Pds5bQ4VA53 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC32.03■■■□□ 2.72
Pds5bQ4VA53 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC32.03■■■□□ 2.72
Pds5bQ4VA53 Gm5712-201ENSMUST00000199748 1043 ntBASIC32.03■■■□□ 2.72
Pds5bQ4VA53 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Pds5bQ4VA53 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
Pds5bQ4VA53 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
Pds5bQ4VA53 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Pds5bQ4VA53 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Pds5bQ4VA53 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Pds5bQ4VA53 Gm12504-201ENSMUST00000120860 2231 ntBASIC32.02■■■□□ 2.72
Pds5bQ4VA53 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC32.02■■■□□ 2.72
Pds5bQ4VA53 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC32.02■■■□□ 2.72
Pds5bQ4VA53 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC32.02■■■□□ 2.72
Pds5bQ4VA53 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Pds5bQ4VA53 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC32.02■■■□□ 2.72
Pds5bQ4VA53 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC32.02■■■□□ 2.72
Pds5bQ4VA53 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Pds5bQ4VA53 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC32.02■■■□□ 2.72
Pds5bQ4VA53 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
Pds5bQ4VA53 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Pds5bQ4VA53 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC32.01■■■□□ 2.72
Pds5bQ4VA53 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Pds5bQ4VA53 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC32.01■■■□□ 2.71
Pds5bQ4VA53 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC32■■■□□ 2.71
Pds5bQ4VA53 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC32■■■□□ 2.71
Pds5bQ4VA53 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC32■■■□□ 2.71
Pds5bQ4VA53 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC32■■■□□ 2.71
Pds5bQ4VA53 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC32■■■□□ 2.71
Pds5bQ4VA53 Gm13884-201ENSMUST00000118103 829 ntBASIC32■■■□□ 2.71
Pds5bQ4VA53 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC32■■■□□ 2.71
Pds5bQ4VA53 Gm7213-201ENSMUST00000215977 950 ntBASIC32■■■□□ 2.71
Pds5bQ4VA53 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Pds5bQ4VA53 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Pds5bQ4VA53 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Pds5bQ4VA53 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC31.99■■■□□ 2.71
Pds5bQ4VA53 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Pds5bQ4VA53 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
Pds5bQ4VA53 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC31.99■■■□□ 2.71
Pds5bQ4VA53 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC31.98■■■□□ 2.71
Pds5bQ4VA53 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Pds5bQ4VA53 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Pds5bQ4VA53 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Pds5bQ4VA53 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Pds5bQ4VA53 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
Pds5bQ4VA53 Gm37935-201ENSMUST00000192012 982 ntBASIC31.97■■■□□ 2.71
Pds5bQ4VA53 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Pds5bQ4VA53 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Pds5bQ4VA53 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
Pds5bQ4VA53 AC126028.2-201ENSMUST00000228100 1833 ntBASIC31.96■■■□□ 2.71
Pds5bQ4VA53 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Pds5bQ4VA53 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
Pds5bQ4VA53 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Pds5bQ4VA53 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Pds5bQ4VA53 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
Pds5bQ4VA53 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Pds5bQ4VA53 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC31.95■■■□□ 2.71
Pds5bQ4VA53 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Pds5bQ4VA53 Mir8098-201ENSMUST00000184011 137 ntBASIC31.95■■■□□ 2.71
Pds5bQ4VA53 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC31.95■■■□□ 2.71
Pds5bQ4VA53 Gm43073-201ENSMUST00000198200 1189 ntBASIC31.95■■■□□ 2.71
Pds5bQ4VA53 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
Pds5bQ4VA53 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC31.95■■■□□ 2.71
Pds5bQ4VA53 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Pds5bQ4VA53 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC31.94■■■□□ 2.7
Pds5bQ4VA53 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
Pds5bQ4VA53 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Pds5bQ4VA53 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Pds5bQ4VA53 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Pds5bQ4VA53 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Pds5bQ4VA53 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Pds5bQ4VA53 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC31.93■■■□□ 2.7
Pds5bQ4VA53 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Pds5bQ4VA53 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC31.93■■■□□ 2.7
Pds5bQ4VA53 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC31.93■■■□□ 2.7
Pds5bQ4VA53 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Pds5bQ4VA53 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Pds5bQ4VA53 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Pds5bQ4VA53 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Pds5bQ4VA53 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC31.93■■■□□ 2.7
Pds5bQ4VA53 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Pds5bQ4VA53 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Pds5bQ4VA53 Gm27459-201ENSMUST00000184860 107 ntBASIC31.92■■■□□ 2.7
Pds5bQ4VA53 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Pds5bQ4VA53 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Pds5bQ4VA53 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC31.92■■■□□ 2.7
Pds5bQ4VA53 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC31.91■■■□□ 2.7
Pds5bQ4VA53 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC31.91■■■□□ 2.7
Pds5bQ4VA53 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
Pds5bQ4VA53 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC31.91■■■□□ 2.7
Pds5bQ4VA53 Gm11860-201ENSMUST00000122346 1010 ntBASIC31.91■■■□□ 2.7
Pds5bQ4VA53 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Pds5bQ4VA53 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC31.9■■■□□ 2.7
Pds5bQ4VA53 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Pds5bQ4VA53 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms