Protein–RNA interactions for Protein: Q3V3V9

Carmil2, Capping protein, Arp2/3 and myosin-I linker protein 2, mousemouse

Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil2Q3V3V9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Carmil2Q3V3V9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Carmil2Q3V3V9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Carmil2Q3V3V9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Carmil2Q3V3V9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Carmil2Q3V3V9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.32■□□□□ 0.84
Carmil2Q3V3V9 Gm21362-201ENSMUST00000194272 928 ntBASIC20.32■□□□□ 0.84
Carmil2Q3V3V9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Carmil2Q3V3V9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Carmil2Q3V3V9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Carmil2Q3V3V9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Carmil2Q3V3V9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Carmil2Q3V3V9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil2Q3V3V9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Carmil2Q3V3V9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil2Q3V3V9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil2Q3V3V9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil2Q3V3V9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil2Q3V3V9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil2Q3V3V9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil2Q3V3V9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil2Q3V3V9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil2Q3V3V9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil2Q3V3V9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.31■□□□□ 0.84
Carmil2Q3V3V9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil2Q3V3V9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Carmil2Q3V3V9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Carmil2Q3V3V9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Carmil2Q3V3V9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.3■□□□□ 0.84
Carmil2Q3V3V9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Carmil2Q3V3V9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Carmil2Q3V3V9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Carmil2Q3V3V9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.3■□□□□ 0.84
Carmil2Q3V3V9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Carmil2Q3V3V9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Carmil2Q3V3V9 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.3■□□□□ 0.84
Carmil2Q3V3V9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.3■□□□□ 0.84
Carmil2Q3V3V9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.3■□□□□ 0.84
Carmil2Q3V3V9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Carmil2Q3V3V9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Carmil2Q3V3V9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Carmil2Q3V3V9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Carmil2Q3V3V9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.29■□□□□ 0.84
Carmil2Q3V3V9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Carmil2Q3V3V9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Carmil2Q3V3V9 Gm26524-201ENSMUST00000192339 390 ntBASIC20.29■□□□□ 0.84
Carmil2Q3V3V9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.29■□□□□ 0.84
Carmil2Q3V3V9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Carmil2Q3V3V9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Carmil2Q3V3V9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Carmil2Q3V3V9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Carmil2Q3V3V9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Carmil2Q3V3V9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Carmil2Q3V3V9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Carmil2Q3V3V9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Carmil2Q3V3V9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Carmil2Q3V3V9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Carmil2Q3V3V9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Carmil2Q3V3V9 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.28■□□□□ 0.84
Carmil2Q3V3V9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.28■□□□□ 0.84
Carmil2Q3V3V9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.28■□□□□ 0.84
Carmil2Q3V3V9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Carmil2Q3V3V9 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.28■□□□□ 0.84
Carmil2Q3V3V9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Carmil2Q3V3V9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Carmil2Q3V3V9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Carmil2Q3V3V9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Carmil2Q3V3V9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Carmil2Q3V3V9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.27■□□□□ 0.84
Carmil2Q3V3V9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Carmil2Q3V3V9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Carmil2Q3V3V9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Carmil2Q3V3V9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Carmil2Q3V3V9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Carmil2Q3V3V9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Carmil2Q3V3V9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.27■□□□□ 0.84
Carmil2Q3V3V9 Gm37055-201ENSMUST00000191866 133 ntBASIC20.27■□□□□ 0.84
Carmil2Q3V3V9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Carmil2Q3V3V9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Carmil2Q3V3V9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Carmil2Q3V3V9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Carmil2Q3V3V9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Carmil2Q3V3V9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.27■□□□□ 0.83
Carmil2Q3V3V9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Carmil2Q3V3V9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Carmil2Q3V3V9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil2Q3V3V9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil2Q3V3V9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil2Q3V3V9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil2Q3V3V9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil2Q3V3V9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.26■□□□□ 0.83
Carmil2Q3V3V9 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.26■□□□□ 0.83
Carmil2Q3V3V9 Rab3c-203ENSMUST00000224180 967 ntBASIC20.26■□□□□ 0.83
Carmil2Q3V3V9 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.26■□□□□ 0.83
Carmil2Q3V3V9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil2Q3V3V9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.26■□□□□ 0.83
Carmil2Q3V3V9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil2Q3V3V9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil2Q3V3V9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Carmil2Q3V3V9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms