Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim80Q3V061 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim80Q3V061 Gm18671-201ENSMUST00000214826 683 ntBASIC18.76■□□□□ 0.59
Trim80Q3V061 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trim80Q3V061 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim80Q3V061 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim80Q3V061 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim80Q3V061 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim80Q3V061 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Trim80Q3V061 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Trim80Q3V061 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.75■□□□□ 0.59
Trim80Q3V061 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim80Q3V061 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim80Q3V061 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim80Q3V061 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim80Q3V061 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
Trim80Q3V061 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim80Q3V061 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim80Q3V061 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim80Q3V061 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trim80Q3V061 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim80Q3V061 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim80Q3V061 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim80Q3V061 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim80Q3V061 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim80Q3V061 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim80Q3V061 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim80Q3V061 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim80Q3V061 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim80Q3V061 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim80Q3V061 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim80Q3V061 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim80Q3V061 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim80Q3V061 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim80Q3V061 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim80Q3V061 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim80Q3V061 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim80Q3V061 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim80Q3V061 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim80Q3V061 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim80Q3V061 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Trim80Q3V061 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim80Q3V061 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim80Q3V061 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim80Q3V061 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.73■□□□□ 0.59
Trim80Q3V061 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim80Q3V061 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim80Q3V061 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim80Q3V061 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim80Q3V061 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trim80Q3V061 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trim80Q3V061 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.72■□□□□ 0.59
Trim80Q3V061 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trim80Q3V061 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim80Q3V061 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Trim80Q3V061 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim80Q3V061 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trim80Q3V061 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim80Q3V061 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trim80Q3V061 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim80Q3V061 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim80Q3V061 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim80Q3V061 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim80Q3V061 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim80Q3V061 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim80Q3V061 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim80Q3V061 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim80Q3V061 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim80Q3V061 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim80Q3V061 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim80Q3V061 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim80Q3V061 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim80Q3V061 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim80Q3V061 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim80Q3V061 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim80Q3V061 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.71■□□□□ 0.59
Trim80Q3V061 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim80Q3V061 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim80Q3V061 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim80Q3V061 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim80Q3V061 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim80Q3V061 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Trim80Q3V061 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim80Q3V061 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim80Q3V061 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim80Q3V061 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim80Q3V061 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim80Q3V061 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim80Q3V061 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim80Q3V061 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim80Q3V061 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim80Q3V061 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim80Q3V061 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim80Q3V061 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim80Q3V061 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim80Q3V061 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
Trim80Q3V061 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim80Q3V061 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim80Q3V061 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim80Q3V061 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms