Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim40Q3UWA4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim40Q3UWA4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trim40Q3UWA4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim40Q3UWA4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim40Q3UWA4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trim40Q3UWA4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Trim40Q3UWA4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim40Q3UWA4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim40Q3UWA4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim40Q3UWA4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.08■□□□□ 0.32
Trim40Q3UWA4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim40Q3UWA4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim40Q3UWA4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim40Q3UWA4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim40Q3UWA4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim40Q3UWA4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim40Q3UWA4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim40Q3UWA4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trim40Q3UWA4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim40Q3UWA4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim40Q3UWA4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim40Q3UWA4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim40Q3UWA4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim40Q3UWA4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.07■□□□□ 0.32
Trim40Q3UWA4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim40Q3UWA4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim40Q3UWA4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim40Q3UWA4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim40Q3UWA4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim40Q3UWA4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim40Q3UWA4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim40Q3UWA4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.07■□□□□ 0.32
Trim40Q3UWA4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim40Q3UWA4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trim40Q3UWA4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim40Q3UWA4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim40Q3UWA4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim40Q3UWA4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trim40Q3UWA4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim40Q3UWA4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim40Q3UWA4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim40Q3UWA4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim40Q3UWA4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim40Q3UWA4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim40Q3UWA4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim40Q3UWA4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim40Q3UWA4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim40Q3UWA4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim40Q3UWA4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim40Q3UWA4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim40Q3UWA4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Trim40Q3UWA4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim40Q3UWA4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim40Q3UWA4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim40Q3UWA4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim40Q3UWA4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim40Q3UWA4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim40Q3UWA4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim40Q3UWA4 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.05■□□□□ 0.32
Trim40Q3UWA4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim40Q3UWA4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim40Q3UWA4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim40Q3UWA4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim40Q3UWA4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.05■□□□□ 0.32
Trim40Q3UWA4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim40Q3UWA4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trim40Q3UWA4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim40Q3UWA4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim40Q3UWA4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim40Q3UWA4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim40Q3UWA4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim40Q3UWA4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim40Q3UWA4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim40Q3UWA4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim40Q3UWA4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim40Q3UWA4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.04■□□□□ 0.32
Trim40Q3UWA4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim40Q3UWA4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Trim40Q3UWA4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim40Q3UWA4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim40Q3UWA4 Gm9847-201ENSMUST00000052528 599 ntBASIC17.04■□□□□ 0.32
Trim40Q3UWA4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim40Q3UWA4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim40Q3UWA4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim40Q3UWA4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim40Q3UWA4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim40Q3UWA4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim40Q3UWA4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim40Q3UWA4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim40Q3UWA4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim40Q3UWA4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim40Q3UWA4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim40Q3UWA4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim40Q3UWA4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim40Q3UWA4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim40Q3UWA4 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.03■□□□□ 0.32
Trim40Q3UWA4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim40Q3UWA4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim40Q3UWA4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms