Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cdkl5Q3UTQ8 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.09■□□□□ 0.97
Cdkl5Q3UTQ8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cdkl5Q3UTQ8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdkl5Q3UTQ8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdkl5Q3UTQ8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Cdkl5Q3UTQ8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
Cdkl5Q3UTQ8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Cdkl5Q3UTQ8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdkl5Q3UTQ8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Cdkl5Q3UTQ8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdkl5Q3UTQ8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cdkl5Q3UTQ8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cdkl5Q3UTQ8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cdkl5Q3UTQ8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Cdkl5Q3UTQ8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Cdkl5Q3UTQ8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdkl5Q3UTQ8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdkl5Q3UTQ8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.07■□□□□ 0.96
Cdkl5Q3UTQ8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdkl5Q3UTQ8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Cdkl5Q3UTQ8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cdkl5Q3UTQ8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Cdkl5Q3UTQ8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cdkl5Q3UTQ8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdkl5Q3UTQ8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdkl5Q3UTQ8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Cdkl5Q3UTQ8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cdkl5Q3UTQ8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdkl5Q3UTQ8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cdkl5Q3UTQ8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cdkl5Q3UTQ8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdkl5Q3UTQ8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Cdkl5Q3UTQ8 Mir5133-201ENSMUST00000174955 77 ntBASIC21.06■□□□□ 0.96
Cdkl5Q3UTQ8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdkl5Q3UTQ8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.06■□□□□ 0.96
Cdkl5Q3UTQ8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.06■□□□□ 0.96
Cdkl5Q3UTQ8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdkl5Q3UTQ8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdkl5Q3UTQ8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cdkl5Q3UTQ8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.06■□□□□ 0.96
Cdkl5Q3UTQ8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdkl5Q3UTQ8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cdkl5Q3UTQ8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdkl5Q3UTQ8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Gm37179-201ENSMUST00000194862 823 ntBASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cdkl5Q3UTQ8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkl5Q3UTQ8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Cdkl5Q3UTQ8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkl5Q3UTQ8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkl5Q3UTQ8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkl5Q3UTQ8 Gm12933-201ENSMUST00000120203 872 ntBASIC21.04■□□□□ 0.96
Cdkl5Q3UTQ8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkl5Q3UTQ8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.04■□□□□ 0.96
Cdkl5Q3UTQ8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkl5Q3UTQ8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkl5Q3UTQ8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.04■□□□□ 0.96
Cdkl5Q3UTQ8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkl5Q3UTQ8 Tgds-204ENSMUST00000228543 1594 ntBASIC21.04■□□□□ 0.96
Cdkl5Q3UTQ8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cdkl5Q3UTQ8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkl5Q3UTQ8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkl5Q3UTQ8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkl5Q3UTQ8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdkl5Q3UTQ8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdkl5Q3UTQ8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdkl5Q3UTQ8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdkl5Q3UTQ8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdkl5Q3UTQ8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.03■□□□□ 0.96
Cdkl5Q3UTQ8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cdkl5Q3UTQ8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdkl5Q3UTQ8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.03■□□□□ 0.96
Cdkl5Q3UTQ8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdkl5Q3UTQ8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Cdkl5Q3UTQ8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.03■□□□□ 0.96
Cdkl5Q3UTQ8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cdkl5Q3UTQ8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cdkl5Q3UTQ8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdkl5Q3UTQ8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdkl5Q3UTQ8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdkl5Q3UTQ8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms