Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam196aQ3USH1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Fam196aQ3USH1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Fam196aQ3USH1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam196aQ3USH1 Iqck-206ENSMUST00000208658 2891 ntBASIC18.3■□□□□ 0.52
Fam196aQ3USH1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.3■□□□□ 0.52
Fam196aQ3USH1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam196aQ3USH1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam196aQ3USH1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Fam196aQ3USH1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.3■□□□□ 0.52
Fam196aQ3USH1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam196aQ3USH1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam196aQ3USH1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam196aQ3USH1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam196aQ3USH1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Fam196aQ3USH1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam196aQ3USH1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Fam196aQ3USH1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Fam196aQ3USH1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.3■□□□□ 0.52
Fam196aQ3USH1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.29■□□□□ 0.52
Fam196aQ3USH1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam196aQ3USH1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam196aQ3USH1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam196aQ3USH1 Gm43514-201ENSMUST00000198852 424 ntBASIC18.29■□□□□ 0.52
Fam196aQ3USH1 Gm5587-201ENSMUST00000206270 674 ntBASIC18.29■□□□□ 0.52
Fam196aQ3USH1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Fam196aQ3USH1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Fam196aQ3USH1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam196aQ3USH1 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.29■□□□□ 0.52
Fam196aQ3USH1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Fam196aQ3USH1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam196aQ3USH1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.29■□□□□ 0.52
Fam196aQ3USH1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam196aQ3USH1 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.28■□□□□ 0.52
Fam196aQ3USH1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.28■□□□□ 0.52
Fam196aQ3USH1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.28■□□□□ 0.52
Fam196aQ3USH1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Fam196aQ3USH1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Fam196aQ3USH1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam196aQ3USH1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam196aQ3USH1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam196aQ3USH1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Fam196aQ3USH1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam196aQ3USH1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam196aQ3USH1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam196aQ3USH1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Fam196aQ3USH1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Fam196aQ3USH1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam196aQ3USH1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam196aQ3USH1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Fam196aQ3USH1 Gm16061-201ENSMUST00000122167 857 ntBASIC18.27■□□□□ 0.52
Fam196aQ3USH1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Fam196aQ3USH1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.27■□□□□ 0.52
Fam196aQ3USH1 Mzt1-203ENSMUST00000227948 952 ntBASIC18.27■□□□□ 0.52
Fam196aQ3USH1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Fam196aQ3USH1 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.27■□□□□ 0.52
Fam196aQ3USH1 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.27■□□□□ 0.52
Fam196aQ3USH1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Fam196aQ3USH1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.27■□□□□ 0.51
Fam196aQ3USH1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Fam196aQ3USH1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fam196aQ3USH1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Fam196aQ3USH1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fam196aQ3USH1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fam196aQ3USH1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fam196aQ3USH1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.26■□□□□ 0.51
Fam196aQ3USH1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.26■□□□□ 0.51
Fam196aQ3USH1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fam196aQ3USH1 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.26■□□□□ 0.51
Fam196aQ3USH1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam196aQ3USH1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam196aQ3USH1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam196aQ3USH1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Fam196aQ3USH1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam196aQ3USH1 Gm29518-201ENSMUST00000190858 372 ntBASIC18.25■□□□□ 0.51
Fam196aQ3USH1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam196aQ3USH1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Fam196aQ3USH1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam196aQ3USH1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Fam196aQ3USH1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Fam196aQ3USH1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam196aQ3USH1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam196aQ3USH1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Fam196aQ3USH1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam196aQ3USH1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam196aQ3USH1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam196aQ3USH1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fam196aQ3USH1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fam196aQ3USH1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fam196aQ3USH1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Fam196aQ3USH1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Fam196aQ3USH1 Gm18958-201ENSMUST00000174258 762 ntBASIC18.24■□□□□ 0.51
Fam196aQ3USH1 Gm6443-201ENSMUST00000203599 874 ntBASIC18.24■□□□□ 0.51
Fam196aQ3USH1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fam196aQ3USH1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Fam196aQ3USH1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.24■□□□□ 0.51
Fam196aQ3USH1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fam196aQ3USH1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Fam196aQ3USH1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fam196aQ3USH1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms