Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Zfp560Q3URI6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zfp560Q3URI6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Zfp560Q3URI6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Zfp560Q3URI6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zfp560Q3URI6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Zfp560Q3URI6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zfp560Q3URI6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Zfp560Q3URI6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.23■□□□□ 0.51
Zfp560Q3URI6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp560Q3URI6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp560Q3URI6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp560Q3URI6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp560Q3URI6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp560Q3URI6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp560Q3URI6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp560Q3URI6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.22■□□□□ 0.51
Zfp560Q3URI6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp560Q3URI6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp560Q3URI6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp560Q3URI6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp560Q3URI6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp560Q3URI6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp560Q3URI6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp560Q3URI6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Zfp560Q3URI6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp560Q3URI6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.21■□□□□ 0.51
Zfp560Q3URI6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp560Q3URI6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.21■□□□□ 0.51
Zfp560Q3URI6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp560Q3URI6 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.21■□□□□ 0.51
Zfp560Q3URI6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Zfp560Q3URI6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.21■□□□□ 0.51
Zfp560Q3URI6 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.21■□□□□ 0.51
Zfp560Q3URI6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp560Q3URI6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Zfp560Q3URI6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp560Q3URI6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Zfp560Q3URI6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp560Q3URI6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.21■□□□□ 0.51
Zfp560Q3URI6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp560Q3URI6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.2■□□□□ 0.5
Zfp560Q3URI6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Zfp560Q3URI6 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.2■□□□□ 0.5
Zfp560Q3URI6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Zfp560Q3URI6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zfp560Q3URI6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zfp560Q3URI6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zfp560Q3URI6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Zfp560Q3URI6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.19■□□□□ 0.5
Zfp560Q3URI6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.19■□□□□ 0.5
Zfp560Q3URI6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Zfp560Q3URI6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.19■□□□□ 0.5
Zfp560Q3URI6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.19■□□□□ 0.5
Zfp560Q3URI6 Gm44549-201ENSMUST00000208351 577 ntBASIC18.19■□□□□ 0.5
Zfp560Q3URI6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.19■□□□□ 0.5
Zfp560Q3URI6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Zfp560Q3URI6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Zfp560Q3URI6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.19■□□□□ 0.5
Zfp560Q3URI6 Gm4968-201ENSMUST00000071458 858 ntBASIC18.19■□□□□ 0.5
Zfp560Q3URI6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Zfp560Q3URI6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Zfp560Q3URI6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zfp560Q3URI6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.18■□□□□ 0.5
Zfp560Q3URI6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zfp560Q3URI6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Zfp560Q3URI6 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.18■□□□□ 0.5
Zfp560Q3URI6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zfp560Q3URI6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zfp560Q3URI6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zfp560Q3URI6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zfp560Q3URI6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Zfp560Q3URI6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Zfp560Q3URI6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zfp560Q3URI6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zfp560Q3URI6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zfp560Q3URI6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zfp560Q3URI6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zfp560Q3URI6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zfp560Q3URI6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zfp560Q3URI6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Zfp560Q3URI6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms