Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp30Q3UN04 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.27■□□□□ 0.52
Usp30Q3UN04 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp30Q3UN04 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Usp30Q3UN04 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.27■□□□□ 0.52
Usp30Q3UN04 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Usp30Q3UN04 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.27■□□□□ 0.52
Usp30Q3UN04 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.27■□□□□ 0.52
Usp30Q3UN04 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.27■□□□□ 0.52
Usp30Q3UN04 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Usp30Q3UN04 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Usp30Q3UN04 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp30Q3UN04 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.27■□□□□ 0.51
Usp30Q3UN04 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Usp30Q3UN04 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Usp30Q3UN04 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp30Q3UN04 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp30Q3UN04 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp30Q3UN04 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp30Q3UN04 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp30Q3UN04 Gm15565-201ENSMUST00000118890 427 ntBASIC18.26■□□□□ 0.51
Usp30Q3UN04 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp30Q3UN04 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp30Q3UN04 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp30Q3UN04 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp30Q3UN04 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp30Q3UN04 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp30Q3UN04 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp30Q3UN04 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.25■□□□□ 0.51
Usp30Q3UN04 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp30Q3UN04 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp30Q3UN04 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp30Q3UN04 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Usp30Q3UN04 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Usp30Q3UN04 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp30Q3UN04 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp30Q3UN04 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp30Q3UN04 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.25■□□□□ 0.51
Usp30Q3UN04 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp30Q3UN04 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp30Q3UN04 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.25■□□□□ 0.51
Usp30Q3UN04 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp30Q3UN04 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp30Q3UN04 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp30Q3UN04 Gm7977-201ENSMUST00000193787 748 ntBASIC18.25■□□□□ 0.51
Usp30Q3UN04 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.25■□□□□ 0.51
Usp30Q3UN04 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp30Q3UN04 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp30Q3UN04 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp30Q3UN04 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp30Q3UN04 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp30Q3UN04 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp30Q3UN04 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp30Q3UN04 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Usp30Q3UN04 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp30Q3UN04 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Usp30Q3UN04 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp30Q3UN04 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.24■□□□□ 0.51
Usp30Q3UN04 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp30Q3UN04 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.24■□□□□ 0.51
Usp30Q3UN04 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Usp30Q3UN04 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp30Q3UN04 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Gm42545-201ENSMUST00000202755 922 ntBASIC18.23■□□□□ 0.51
Usp30Q3UN04 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp30Q3UN04 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Usp30Q3UN04 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.22■□□□□ 0.51
Usp30Q3UN04 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.22■□□□□ 0.51
Usp30Q3UN04 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp30Q3UN04 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.22■□□□□ 0.51
Usp30Q3UN04 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp30Q3UN04 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Usp30Q3UN04 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Usp30Q3UN04 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Usp30Q3UN04 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms