Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.6■□□□□ 0.41
Rnf44Q3UHJ8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.6■□□□□ 0.41
Rnf44Q3UHJ8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf44Q3UHJ8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf44Q3UHJ8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.6■□□□□ 0.41
Rnf44Q3UHJ8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rnf44Q3UHJ8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf44Q3UHJ8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf44Q3UHJ8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf44Q3UHJ8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf44Q3UHJ8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf44Q3UHJ8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf44Q3UHJ8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf44Q3UHJ8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf44Q3UHJ8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.59■□□□□ 0.41
Rnf44Q3UHJ8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.59■□□□□ 0.41
Rnf44Q3UHJ8 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.59■□□□□ 0.41
Rnf44Q3UHJ8 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.59■□□□□ 0.41
Rnf44Q3UHJ8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.59■□□□□ 0.41
Rnf44Q3UHJ8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.59■□□□□ 0.41
Rnf44Q3UHJ8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf44Q3UHJ8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf44Q3UHJ8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rnf44Q3UHJ8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
Rnf44Q3UHJ8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf44Q3UHJ8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf44Q3UHJ8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf44Q3UHJ8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf44Q3UHJ8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.58■□□□□ 0.41
Rnf44Q3UHJ8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf44Q3UHJ8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.58■□□□□ 0.4
Rnf44Q3UHJ8 Gm12441-201ENSMUST00000121806 588 ntBASIC17.58■□□□□ 0.4
Rnf44Q3UHJ8 Gm44549-201ENSMUST00000208351 577 ntBASIC17.58■□□□□ 0.4
Rnf44Q3UHJ8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Rnf44Q3UHJ8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf44Q3UHJ8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rnf44Q3UHJ8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rnf44Q3UHJ8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.58■□□□□ 0.4
Rnf44Q3UHJ8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf44Q3UHJ8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf44Q3UHJ8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf44Q3UHJ8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf44Q3UHJ8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf44Q3UHJ8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf44Q3UHJ8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf44Q3UHJ8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf44Q3UHJ8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf44Q3UHJ8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Rnf44Q3UHJ8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf44Q3UHJ8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf44Q3UHJ8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.57■□□□□ 0.4
Rnf44Q3UHJ8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.57■□□□□ 0.4
Rnf44Q3UHJ8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf44Q3UHJ8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rnf44Q3UHJ8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf44Q3UHJ8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf44Q3UHJ8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf44Q3UHJ8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf44Q3UHJ8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf44Q3UHJ8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf44Q3UHJ8 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.56■□□□□ 0.4
Rnf44Q3UHJ8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf44Q3UHJ8 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.56■□□□□ 0.4
Rnf44Q3UHJ8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rnf44Q3UHJ8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rnf44Q3UHJ8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf44Q3UHJ8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.56■□□□□ 0.4
Rnf44Q3UHJ8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.56■□□□□ 0.4
Rnf44Q3UHJ8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf44Q3UHJ8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf44Q3UHJ8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rnf44Q3UHJ8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf44Q3UHJ8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf44Q3UHJ8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf44Q3UHJ8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.54■□□□□ 0.4
Rnf44Q3UHJ8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf44Q3UHJ8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf44Q3UHJ8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf44Q3UHJ8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms