Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snx27Q3UHD6 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.69■□□□□ 0.74
Snx27Q3UHD6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snx27Q3UHD6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx27Q3UHD6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx27Q3UHD6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.69■□□□□ 0.74
Snx27Q3UHD6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx27Q3UHD6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snx27Q3UHD6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx27Q3UHD6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Snx27Q3UHD6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.68■□□□□ 0.74
Snx27Q3UHD6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.68■□□□□ 0.74
Snx27Q3UHD6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx27Q3UHD6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.68■□□□□ 0.74
Snx27Q3UHD6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx27Q3UHD6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snx27Q3UHD6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx27Q3UHD6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx27Q3UHD6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.68■□□□□ 0.74
Snx27Q3UHD6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.68■□□□□ 0.74
Snx27Q3UHD6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.68■□□□□ 0.74
Snx27Q3UHD6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snx27Q3UHD6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snx27Q3UHD6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx27Q3UHD6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx27Q3UHD6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx27Q3UHD6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Snx27Q3UHD6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Snx27Q3UHD6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx27Q3UHD6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.67■□□□□ 0.74
Snx27Q3UHD6 Gm43183-201ENSMUST00000200632 547 ntBASIC19.67■□□□□ 0.74
Snx27Q3UHD6 Gm42545-201ENSMUST00000202755 922 ntBASIC19.67■□□□□ 0.74
Snx27Q3UHD6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Snx27Q3UHD6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx27Q3UHD6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx27Q3UHD6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx27Q3UHD6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.67■□□□□ 0.74
Snx27Q3UHD6 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.67■□□□□ 0.74
Snx27Q3UHD6 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.67■□□□□ 0.74
Snx27Q3UHD6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.67■□□□□ 0.74
Snx27Q3UHD6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Snx27Q3UHD6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx27Q3UHD6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Snx27Q3UHD6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
Snx27Q3UHD6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx27Q3UHD6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Snx27Q3UHD6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx27Q3UHD6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx27Q3UHD6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Snx27Q3UHD6 Mir6349-201ENSMUST00000184059 97 ntBASIC19.66■□□□□ 0.74
Snx27Q3UHD6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.66■□□□□ 0.74
Snx27Q3UHD6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Snx27Q3UHD6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx27Q3UHD6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Snx27Q3UHD6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx27Q3UHD6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx27Q3UHD6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx27Q3UHD6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Snx27Q3UHD6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx27Q3UHD6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx27Q3UHD6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Snx27Q3UHD6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.65■□□□□ 0.74
Snx27Q3UHD6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.65■□□□□ 0.74
Snx27Q3UHD6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.65■□□□□ 0.74
Snx27Q3UHD6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Snx27Q3UHD6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.65■□□□□ 0.74
Snx27Q3UHD6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx27Q3UHD6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Snx27Q3UHD6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx27Q3UHD6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx27Q3UHD6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.65■□□□□ 0.74
Snx27Q3UHD6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Snx27Q3UHD6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Snx27Q3UHD6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Snx27Q3UHD6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.64■□□□□ 0.73
Snx27Q3UHD6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Snx27Q3UHD6 Mir7071-201ENSMUST00000184847 69 ntBASIC19.64■□□□□ 0.73
Snx27Q3UHD6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snx27Q3UHD6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Snx27Q3UHD6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.64■□□□□ 0.73
Snx27Q3UHD6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.64■□□□□ 0.73
Snx27Q3UHD6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Snx27Q3UHD6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Snx27Q3UHD6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snx27Q3UHD6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snx27Q3UHD6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snx27Q3UHD6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Snx27Q3UHD6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Snx27Q3UHD6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Snx27Q3UHD6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snx27Q3UHD6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Snx27Q3UHD6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Snx27Q3UHD6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.63■□□□□ 0.73
Snx27Q3UHD6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snx27Q3UHD6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.63■□□□□ 0.73
Snx27Q3UHD6 Gm37292-201ENSMUST00000192062 758 ntBASIC19.63■□□□□ 0.73
Snx27Q3UHD6 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.63■□□□□ 0.73
Snx27Q3UHD6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snx27Q3UHD6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snx27Q3UHD6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms