Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.33■□□□□ 0.21
Rnf149Q3U2C5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf149Q3U2C5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf149Q3U2C5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf149Q3U2C5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.32■□□□□ 0.2
Rnf149Q3U2C5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf149Q3U2C5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf149Q3U2C5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf149Q3U2C5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.32■□□□□ 0.2
Rnf149Q3U2C5 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.32■□□□□ 0.2
Rnf149Q3U2C5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf149Q3U2C5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf149Q3U2C5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf149Q3U2C5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf149Q3U2C5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf149Q3U2C5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf149Q3U2C5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf149Q3U2C5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Rnf149Q3U2C5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf149Q3U2C5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf149Q3U2C5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf149Q3U2C5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf149Q3U2C5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf149Q3U2C5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.31■□□□□ 0.2
Rnf149Q3U2C5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf149Q3U2C5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Rnf149Q3U2C5 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.31■□□□□ 0.2
Rnf149Q3U2C5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rnf149Q3U2C5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf149Q3U2C5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf149Q3U2C5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Rnf149Q3U2C5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf149Q3U2C5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rnf149Q3U2C5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf149Q3U2C5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf149Q3U2C5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf149Q3U2C5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf149Q3U2C5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rnf149Q3U2C5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf149Q3U2C5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf149Q3U2C5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf149Q3U2C5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf149Q3U2C5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf149Q3U2C5 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf149Q3U2C5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf149Q3U2C5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rnf149Q3U2C5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf149Q3U2C5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf149Q3U2C5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf149Q3U2C5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf149Q3U2C5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf149Q3U2C5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf149Q3U2C5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf149Q3U2C5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf149Q3U2C5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rnf149Q3U2C5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf149Q3U2C5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf149Q3U2C5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf149Q3U2C5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms