Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Gm22325-201ENSMUST00000158904 308 ntBASIC18.3■□□□□ 0.52
Shcbp1lQ3TTP0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Shcbp1lQ3TTP0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.3■□□□□ 0.52
Shcbp1lQ3TTP0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Shcbp1lQ3TTP0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shcbp1lQ3TTP0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shcbp1lQ3TTP0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shcbp1lQ3TTP0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Shcbp1lQ3TTP0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shcbp1lQ3TTP0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shcbp1lQ3TTP0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shcbp1lQ3TTP0 Gm11249-201ENSMUST00000117071 859 ntBASIC18.29■□□□□ 0.52
Shcbp1lQ3TTP0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shcbp1lQ3TTP0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Shcbp1lQ3TTP0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shcbp1lQ3TTP0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.29■□□□□ 0.52
Shcbp1lQ3TTP0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shcbp1lQ3TTP0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shcbp1lQ3TTP0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shcbp1lQ3TTP0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shcbp1lQ3TTP0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shcbp1lQ3TTP0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.29■□□□□ 0.52
Shcbp1lQ3TTP0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shcbp1lQ3TTP0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
Shcbp1lQ3TTP0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shcbp1lQ3TTP0 Flg-201ENSMUST00000050758 1488 ntBASIC18.28■□□□□ 0.52
Shcbp1lQ3TTP0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shcbp1lQ3TTP0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shcbp1lQ3TTP0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shcbp1lQ3TTP0 Gm5643-201ENSMUST00000117081 966 ntBASIC18.28■□□□□ 0.52
Shcbp1lQ3TTP0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.28■□□□□ 0.52
Shcbp1lQ3TTP0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shcbp1lQ3TTP0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shcbp1lQ3TTP0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.28■□□□□ 0.52
Shcbp1lQ3TTP0 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.28■□□□□ 0.52
Shcbp1lQ3TTP0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shcbp1lQ3TTP0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Shcbp1lQ3TTP0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shcbp1lQ3TTP0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.28■□□□□ 0.52
Shcbp1lQ3TTP0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shcbp1lQ3TTP0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shcbp1lQ3TTP0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shcbp1lQ3TTP0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shcbp1lQ3TTP0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Shcbp1lQ3TTP0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shcbp1lQ3TTP0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Shcbp1lQ3TTP0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Shcbp1lQ3TTP0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shcbp1lQ3TTP0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shcbp1lQ3TTP0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shcbp1lQ3TTP0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shcbp1lQ3TTP0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shcbp1lQ3TTP0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Shcbp1lQ3TTP0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Shcbp1lQ3TTP0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Shcbp1lQ3TTP0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Shcbp1lQ3TTP0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shcbp1lQ3TTP0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shcbp1lQ3TTP0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shcbp1lQ3TTP0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.26■□□□□ 0.51
Shcbp1lQ3TTP0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.26■□□□□ 0.51
Shcbp1lQ3TTP0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.26■□□□□ 0.51
Shcbp1lQ3TTP0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shcbp1lQ3TTP0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.26■□□□□ 0.51
Shcbp1lQ3TTP0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Shcbp1lQ3TTP0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shcbp1lQ3TTP0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Shcbp1lQ3TTP0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Shcbp1lQ3TTP0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Shcbp1lQ3TTP0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shcbp1lQ3TTP0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shcbp1lQ3TTP0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Shcbp1lQ3TTP0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Shcbp1lQ3TTP0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Shcbp1lQ3TTP0 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.25■□□□□ 0.51
Shcbp1lQ3TTP0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shcbp1lQ3TTP0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shcbp1lQ3TTP0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shcbp1lQ3TTP0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shcbp1lQ3TTP0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shcbp1lQ3TTP0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shcbp1lQ3TTP0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shcbp1lQ3TTP0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shcbp1lQ3TTP0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Shcbp1lQ3TTP0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shcbp1lQ3TTP0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shcbp1lQ3TTP0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Shcbp1lQ3TTP0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.24■□□□□ 0.51
Shcbp1lQ3TTP0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Shcbp1lQ3TTP0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shcbp1lQ3TTP0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shcbp1lQ3TTP0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shcbp1lQ3TTP0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Shcbp1lQ3TTP0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Shcbp1lQ3TTP0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.24■□□□□ 0.51
Shcbp1lQ3TTP0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shcbp1lQ3TTP0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shcbp1lQ3TTP0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shcbp1lQ3TTP0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shcbp1lQ3TTP0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms