Protein–RNA interactions for Protein: Q2WF71

Lrfn1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, mousemouse

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn1Q2WF71 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrfn1Q2WF71 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lrfn1Q2WF71 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrfn1Q2WF71 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.79■□□□□ 0.28
Lrfn1Q2WF71 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lrfn1Q2WF71 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Lrfn1Q2WF71 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Lrfn1Q2WF71 Gm6139-201ENSMUST00000079261 882 ntBASIC16.79■□□□□ 0.28
Lrfn1Q2WF71 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.79■□□□□ 0.28
Lrfn1Q2WF71 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lrfn1Q2WF71 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.79■□□□□ 0.28
Lrfn1Q2WF71 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrfn1Q2WF71 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrfn1Q2WF71 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Lrfn1Q2WF71 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lrfn1Q2WF71 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Lrfn1Q2WF71 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrfn1Q2WF71 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lrfn1Q2WF71 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrfn1Q2WF71 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lrfn1Q2WF71 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Lrfn1Q2WF71 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrfn1Q2WF71 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrfn1Q2WF71 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.78■□□□□ 0.28
Lrfn1Q2WF71 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.78■□□□□ 0.28
Lrfn1Q2WF71 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.78■□□□□ 0.28
Lrfn1Q2WF71 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrfn1Q2WF71 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lrfn1Q2WF71 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lrfn1Q2WF71 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrfn1Q2WF71 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.78■□□□□ 0.28
Lrfn1Q2WF71 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lrfn1Q2WF71 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrfn1Q2WF71 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrfn1Q2WF71 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrfn1Q2WF71 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Lrfn1Q2WF71 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrfn1Q2WF71 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrfn1Q2WF71 Serp2-204ENSMUST00000228055 705 ntBASIC16.77■□□□□ 0.28
Lrfn1Q2WF71 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrfn1Q2WF71 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lrfn1Q2WF71 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lrfn1Q2WF71 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lrfn1Q2WF71 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.77■□□□□ 0.27
Lrfn1Q2WF71 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lrfn1Q2WF71 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Lrfn1Q2WF71 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrfn1Q2WF71 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrfn1Q2WF71 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lrfn1Q2WF71 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lrfn1Q2WF71 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrfn1Q2WF71 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.76■□□□□ 0.27
Lrfn1Q2WF71 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lrfn1Q2WF71 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.76■□□□□ 0.27
Lrfn1Q2WF71 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrfn1Q2WF71 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lrfn1Q2WF71 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Lrfn1Q2WF71 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Lrfn1Q2WF71 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lrfn1Q2WF71 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Lrfn1Q2WF71 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lrfn1Q2WF71 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lrfn1Q2WF71 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrfn1Q2WF71 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Lrfn1Q2WF71 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Lrfn1Q2WF71 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrfn1Q2WF71 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrfn1Q2WF71 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Lrfn1Q2WF71 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrfn1Q2WF71 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lrfn1Q2WF71 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrfn1Q2WF71 Gm12251-201ENSMUST00000117893 792 ntBASIC16.74■□□□□ 0.27
Lrfn1Q2WF71 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Lrfn1Q2WF71 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Lrfn1Q2WF71 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrfn1Q2WF71 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrfn1Q2WF71 Dancr-204ENSMUST00000132389 2347 ntBASIC16.74■□□□□ 0.27
Lrfn1Q2WF71 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrfn1Q2WF71 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lrfn1Q2WF71 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrfn1Q2WF71 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms