Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm43545-201ENSMUST00000196765 2779 ntBASIC13.52□□□□□ -0.25
Hspg2Q05793 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hspg2Q05793 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hspg2Q05793 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hspg2Q05793 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Hspg2Q05793 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hspg2Q05793 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hspg2Q05793 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hspg2Q05793 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hspg2Q05793 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hspg2Q05793 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.52□□□□□ -0.25
Hspg2Q05793 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hspg2Q05793 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hspg2Q05793 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hspg2Q05793 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.51□□□□□ -0.25
Hspg2Q05793 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hspg2Q05793 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.51□□□□□ -0.25
Hspg2Q05793 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hspg2Q05793 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hspg2Q05793 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Hspg2Q05793 Gm10138-203ENSMUST00000206952 366 ntBASIC13.51□□□□□ -0.25
Hspg2Q05793 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hspg2Q05793 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hspg2Q05793 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Hspg2Q05793 Gm22697-201ENSMUST00000175194 63 ntBASIC13.51□□□□□ -0.25
Hspg2Q05793 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.51□□□□□ -0.25
Hspg2Q05793 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Hspg2Q05793 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hspg2Q05793 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hspg2Q05793 Gm18032-201ENSMUST00000222541 538 ntBASIC13.5□□□□□ -0.25
Hspg2Q05793 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hspg2Q05793 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hspg2Q05793 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hspg2Q05793 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hspg2Q05793 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Hspg2Q05793 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hspg2Q05793 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hspg2Q05793 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Hspg2Q05793 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hspg2Q05793 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Hspg2Q05793 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Hspg2Q05793 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.5□□□□□ -0.25
Hspg2Q05793 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hspg2Q05793 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.49□□□□□ -0.25
Hspg2Q05793 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Hspg2Q05793 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
Hspg2Q05793 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Hspg2Q05793 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.49□□□□□ -0.25
Hspg2Q05793 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.49□□□□□ -0.25
Hspg2Q05793 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hspg2Q05793 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hspg2Q05793 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hspg2Q05793 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hspg2Q05793 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hspg2Q05793 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hspg2Q05793 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hspg2Q05793 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hspg2Q05793 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hspg2Q05793 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hspg2Q05793 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hspg2Q05793 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Hspg2Q05793 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hspg2Q05793 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hspg2Q05793 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Hspg2Q05793 Gm13042-201ENSMUST00000119244 1955 ntBASIC13.48□□□□□ -0.25
Hspg2Q05793 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Hspg2Q05793 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hspg2Q05793 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hspg2Q05793 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Hspg2Q05793 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hspg2Q05793 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hspg2Q05793 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hspg2Q05793 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hspg2Q05793 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hspg2Q05793 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hspg2Q05793 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hspg2Q05793 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hspg2Q05793 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hspg2Q05793 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hspg2Q05793 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hspg2Q05793 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hspg2Q05793 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hspg2Q05793 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hspg2Q05793 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hspg2Q05793 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hspg2Q05793 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.46□□□□□ -0.25
Hspg2Q05793 Gm12382-201ENSMUST00000122005 922 ntBASIC13.46□□□□□ -0.25
Hspg2Q05793 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hspg2Q05793 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hspg2Q05793 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.46□□□□□ -0.25
Hspg2Q05793 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hspg2Q05793 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.46□□□□□ -0.25
Hspg2Q05793 Gm12085-201ENSMUST00000119263 940 ntBASIC13.46□□□□□ -0.25
Hspg2Q05793 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.46□□□□□ -0.25
Hspg2Q05793 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hspg2Q05793 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Hspg2Q05793 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hspg2Q05793 Hsf1-207ENSMUST00000228371 2102 ntBASIC13.46□□□□□ -0.26
Hspg2Q05793 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hspg2Q05793 Gm17661-201ENSMUST00000170317 270 ntBASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms