Protein–RNA interactions for Protein: P97358

Taf1b, TATA box-binding protein-associated factor RNA polymerase I subunit B, mousemouse

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1bP97358 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1bP97358 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Taf1bP97358 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1bP97358 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.24■□□□□ 0.83
Taf1bP97358 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1bP97358 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1bP97358 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Taf1bP97358 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1bP97358 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Taf1bP97358 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1bP97358 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Taf1bP97358 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1bP97358 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1bP97358 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1bP97358 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1bP97358 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Taf1bP97358 Gm18025-201ENSMUST00000221733 862 ntBASIC20.23■□□□□ 0.83
Taf1bP97358 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1bP97358 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Taf1bP97358 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1bP97358 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1bP97358 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1bP97358 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1bP97358 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.22■□□□□ 0.83
Taf1bP97358 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Taf1bP97358 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1bP97358 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Taf1bP97358 Gm37055-201ENSMUST00000191866 133 ntBASIC20.22■□□□□ 0.83
Taf1bP97358 Gm43183-201ENSMUST00000200632 547 ntBASIC20.22■□□□□ 0.83
Taf1bP97358 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1bP97358 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Taf1bP97358 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1bP97358 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1bP97358 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1bP97358 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.21■□□□□ 0.83
Taf1bP97358 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1bP97358 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1bP97358 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1bP97358 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.21■□□□□ 0.83
Taf1bP97358 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1bP97358 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Taf1bP97358 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.21■□□□□ 0.83
Taf1bP97358 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1bP97358 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1bP97358 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Taf1bP97358 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Taf1bP97358 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Taf1bP97358 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.2■□□□□ 0.82
Taf1bP97358 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Taf1bP97358 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Taf1bP97358 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Taf1bP97358 Gm42545-201ENSMUST00000202755 922 ntBASIC20.2■□□□□ 0.82
Taf1bP97358 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.2■□□□□ 0.82
Taf1bP97358 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Taf1bP97358 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Taf1bP97358 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Taf1bP97358 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Taf1bP97358 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Taf1bP97358 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.19■□□□□ 0.82
Taf1bP97358 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.19■□□□□ 0.82
Taf1bP97358 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1bP97358 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1bP97358 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1bP97358 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1bP97358 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1bP97358 Mir5122-201ENSMUST00000175004 89 ntBASIC20.19■□□□□ 0.82
Taf1bP97358 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1bP97358 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1bP97358 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1bP97358 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1bP97358 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Taf1bP97358 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.19■□□□□ 0.82
Taf1bP97358 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Taf1bP97358 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1bP97358 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1bP97358 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1bP97358 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1bP97358 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1bP97358 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1bP97358 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1bP97358 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.18■□□□□ 0.82
Taf1bP97358 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.18■□□□□ 0.82
Taf1bP97358 Gm37292-201ENSMUST00000192062 758 ntBASIC20.18■□□□□ 0.82
Taf1bP97358 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1bP97358 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1bP97358 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.18■□□□□ 0.82
Taf1bP97358 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Taf1bP97358 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.17■□□□□ 0.82
Taf1bP97358 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Taf1bP97358 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Taf1bP97358 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Taf1bP97358 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.17■□□□□ 0.82
Taf1bP97358 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Taf1bP97358 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Taf1bP97358 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Taf1bP97358 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Taf1bP97358 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Taf1bP97358 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Taf1bP97358 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Taf1bP97358 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms