Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
PrkdcP97313 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PrkdcP97313 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrkdcP97313 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PrkdcP97313 Gm16061-201ENSMUST00000122167 857 ntBASIC12.58□□□□□ -0.4
PrkdcP97313 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PrkdcP97313 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PrkdcP97313 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrkdcP97313 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PrkdcP97313 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrkdcP97313 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrkdcP97313 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PrkdcP97313 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PrkdcP97313 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.57□□□□□ -0.4
PrkdcP97313 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
PrkdcP97313 Gm38285-201ENSMUST00000192928 922 ntBASIC12.57□□□□□ -0.4
PrkdcP97313 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrkdcP97313 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrkdcP97313 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.57□□□□□ -0.4
PrkdcP97313 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.57□□□□□ -0.4
PrkdcP97313 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.57□□□□□ -0.4
PrkdcP97313 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PrkdcP97313 Gm43347-201ENSMUST00000200226 580 ntBASIC12.57□□□□□ -0.4
PrkdcP97313 Gm18206-201ENSMUST00000207027 926 ntBASIC12.57□□□□□ -0.4
PrkdcP97313 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
PrkdcP97313 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
PrkdcP97313 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
PrkdcP97313 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PrkdcP97313 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PrkdcP97313 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PrkdcP97313 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PrkdcP97313 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.57□□□□□ -0.4
PrkdcP97313 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC12.57□□□□□ -0.4
PrkdcP97313 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PrkdcP97313 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PrkdcP97313 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PrkdcP97313 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PrkdcP97313 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.56□□□□□ -0.4
PrkdcP97313 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PrkdcP97313 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PrkdcP97313 Gm7370-201ENSMUST00000219471 767 ntBASIC12.56□□□□□ -0.4
PrkdcP97313 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PrkdcP97313 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PrkdcP97313 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC12.56□□□□□ -0.4
PrkdcP97313 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PrkdcP97313 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PrkdcP97313 Gm15794-201ENSMUST00000120182 631 ntBASIC12.56□□□□□ -0.4
PrkdcP97313 Mir2861-201ENSMUST00000175539 82 ntBASIC12.56□□□□□ -0.4
PrkdcP97313 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PrkdcP97313 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PrkdcP97313 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PrkdcP97313 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PrkdcP97313 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PrkdcP97313 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PrkdcP97313 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PrkdcP97313 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.56□□□□□ -0.4
PrkdcP97313 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PrkdcP97313 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PrkdcP97313 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PrkdcP97313 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PrkdcP97313 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PrkdcP97313 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
PrkdcP97313 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PrkdcP97313 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PrkdcP97313 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PrkdcP97313 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PrkdcP97313 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.55□□□□□ -0.4
PrkdcP97313 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC12.55□□□□□ -0.4
PrkdcP97313 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.55□□□□□ -0.4
PrkdcP97313 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PrkdcP97313 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PrkdcP97313 Mir8098-201ENSMUST00000184011 137 ntBASIC12.55□□□□□ -0.4
PrkdcP97313 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.55□□□□□ -0.4
PrkdcP97313 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
PrkdcP97313 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PrkdcP97313 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
PrkdcP97313 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrkdcP97313 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
PrkdcP97313 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
PrkdcP97313 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PrkdcP97313 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrkdcP97313 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrkdcP97313 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PrkdcP97313 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.54□□□□□ -0.4
PrkdcP97313 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrkdcP97313 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrkdcP97313 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrkdcP97313 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrkdcP97313 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.54□□□□□ -0.4
PrkdcP97313 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrkdcP97313 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrkdcP97313 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrkdcP97313 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrkdcP97313 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PrkdcP97313 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
PrkdcP97313 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
PrkdcP97313 Gm5864-201ENSMUST00000202263 970 ntBASIC12.54□□□□□ -0.4
PrkdcP97313 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PrkdcP97313 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PrkdcP97313 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms