Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43cP86449 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim43cP86449 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trim43cP86449 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim43cP86449 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43cP86449 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43cP86449 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.8■□□□□ 0.76
Trim43cP86449 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43cP86449 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43cP86449 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43cP86449 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43cP86449 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43cP86449 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43cP86449 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43cP86449 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Trim43cP86449 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43cP86449 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Trim43cP86449 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43cP86449 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43cP86449 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43cP86449 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43cP86449 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43cP86449 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43cP86449 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43cP86449 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Trim43cP86449 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trim43cP86449 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trim43cP86449 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trim43cP86449 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43cP86449 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43cP86449 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim43cP86449 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43cP86449 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43cP86449 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43cP86449 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43cP86449 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43cP86449 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trim43cP86449 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43cP86449 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43cP86449 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43cP86449 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43cP86449 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43cP86449 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43cP86449 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43cP86449 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trim43cP86449 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43cP86449 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.78■□□□□ 0.76
Trim43cP86449 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43cP86449 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43cP86449 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43cP86449 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43cP86449 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43cP86449 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43cP86449 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.77■□□□□ 0.76
Trim43cP86449 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim43cP86449 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43cP86449 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43cP86449 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trim43cP86449 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trim43cP86449 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43cP86449 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.77■□□□□ 0.76
Trim43cP86449 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43cP86449 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.77■□□□□ 0.76
Trim43cP86449 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43cP86449 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43cP86449 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43cP86449 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43cP86449 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43cP86449 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43cP86449 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
Trim43cP86449 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Trim43cP86449 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim43cP86449 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43cP86449 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43cP86449 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43cP86449 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trim43cP86449 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43cP86449 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43cP86449 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43cP86449 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43cP86449 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.76■□□□□ 0.75
Trim43cP86449 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.76■□□□□ 0.75
Trim43cP86449 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.76■□□□□ 0.75
Trim43cP86449 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43cP86449 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43cP86449 Gm4968-201ENSMUST00000071458 858 ntBASIC19.76■□□□□ 0.75
Trim43cP86449 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43cP86449 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43cP86449 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43cP86449 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43cP86449 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43cP86449 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim43cP86449 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim43cP86449 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.75■□□□□ 0.75
Trim43cP86449 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim43cP86449 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim43cP86449 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim43cP86449 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim43cP86449 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim43cP86449 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms