Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43bP86448 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Trim43bP86448 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43bP86448 Reep4-203ENSMUST00000226563 1444 ntBASIC18.66■□□□□ 0.58
Trim43bP86448 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43bP86448 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43bP86448 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim43bP86448 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43bP86448 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43bP86448 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43bP86448 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43bP86448 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43bP86448 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.66■□□□□ 0.58
Trim43bP86448 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43bP86448 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Trim43bP86448 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43bP86448 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim43bP86448 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trim43bP86448 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Trim43bP86448 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43bP86448 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43bP86448 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43bP86448 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43bP86448 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.65■□□□□ 0.58
Trim43bP86448 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43bP86448 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43bP86448 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43bP86448 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43bP86448 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43bP86448 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43bP86448 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43bP86448 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43bP86448 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43bP86448 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim43bP86448 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trim43bP86448 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim43bP86448 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43bP86448 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43bP86448 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43bP86448 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim43bP86448 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43bP86448 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43bP86448 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43bP86448 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trim43bP86448 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Trim43bP86448 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43bP86448 Fst-202ENSMUST00000223640 2612 ntBASIC18.64■□□□□ 0.57
Trim43bP86448 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43bP86448 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43bP86448 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43bP86448 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim43bP86448 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trim43bP86448 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43bP86448 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim43bP86448 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43bP86448 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trim43bP86448 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43bP86448 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43bP86448 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43bP86448 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim43bP86448 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim43bP86448 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.63■□□□□ 0.57
Trim43bP86448 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43bP86448 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43bP86448 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43bP86448 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Trim43bP86448 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim43bP86448 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43bP86448 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Trim43bP86448 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43bP86448 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.62■□□□□ 0.57
Trim43bP86448 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43bP86448 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43bP86448 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43bP86448 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43bP86448 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43bP86448 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
Trim43bP86448 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.62■□□□□ 0.57
Trim43bP86448 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim43bP86448 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43bP86448 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43bP86448 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43bP86448 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43bP86448 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43bP86448 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43bP86448 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43bP86448 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43bP86448 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43bP86448 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43bP86448 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43bP86448 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43bP86448 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43bP86448 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trim43bP86448 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Trim43bP86448 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Trim43bP86448 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim43bP86448 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim43bP86448 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43bP86448 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim43bP86448 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms