Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18■□□□□ 0.47
Crnkl1P63154 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
Crnkl1P63154 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Crnkl1P63154 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Crnkl1P63154 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Crnkl1P63154 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Crnkl1P63154 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18■□□□□ 0.47
Crnkl1P63154 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18■□□□□ 0.47
Crnkl1P63154 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Crnkl1P63154 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Crnkl1P63154 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Crnkl1P63154 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Crnkl1P63154 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Crnkl1P63154 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.99■□□□□ 0.47
Crnkl1P63154 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Crnkl1P63154 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Crnkl1P63154 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Crnkl1P63154 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Crnkl1P63154 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Crnkl1P63154 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Crnkl1P63154 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Crnkl1P63154 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Crnkl1P63154 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
Crnkl1P63154 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Crnkl1P63154 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Crnkl1P63154 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Crnkl1P63154 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Crnkl1P63154 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Crnkl1P63154 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Crnkl1P63154 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Crnkl1P63154 Mir7075-201ENSMUST00000184187 82 ntBASIC17.98■□□□□ 0.47
Crnkl1P63154 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Crnkl1P63154 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Crnkl1P63154 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.98■□□□□ 0.47
Crnkl1P63154 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Crnkl1P63154 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Crnkl1P63154 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Crnkl1P63154 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Crnkl1P63154 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Crnkl1P63154 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Crnkl1P63154 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.98■□□□□ 0.47
Crnkl1P63154 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Crnkl1P63154 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Crnkl1P63154 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.97■□□□□ 0.47
Crnkl1P63154 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Crnkl1P63154 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Crnkl1P63154 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Crnkl1P63154 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Crnkl1P63154 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Crnkl1P63154 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Crnkl1P63154 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Crnkl1P63154 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.97■□□□□ 0.47
Crnkl1P63154 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Crnkl1P63154 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Crnkl1P63154 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Crnkl1P63154 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Crnkl1P63154 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Crnkl1P63154 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crnkl1P63154 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crnkl1P63154 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crnkl1P63154 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Crnkl1P63154 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Crnkl1P63154 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Crnkl1P63154 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Crnkl1P63154 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crnkl1P63154 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Crnkl1P63154 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crnkl1P63154 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crnkl1P63154 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crnkl1P63154 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crnkl1P63154 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crnkl1P63154 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crnkl1P63154 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crnkl1P63154 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Crnkl1P63154 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crnkl1P63154 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Crnkl1P63154 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crnkl1P63154 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Crnkl1P63154 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.95■□□□□ 0.46
Crnkl1P63154 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crnkl1P63154 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crnkl1P63154 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crnkl1P63154 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crnkl1P63154 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crnkl1P63154 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crnkl1P63154 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crnkl1P63154 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crnkl1P63154 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Crnkl1P63154 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crnkl1P63154 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crnkl1P63154 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crnkl1P63154 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crnkl1P63154 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crnkl1P63154 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crnkl1P63154 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.94■□□□□ 0.46
Crnkl1P63154 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crnkl1P63154 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Crnkl1P63154 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.94■□□□□ 0.46
Crnkl1P63154 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Crnkl1P63154 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms