Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ube2d3P61079 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.02□□□□□ -0.33
Ube2d3P61079 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ube2d3P61079 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ube2d3P61079 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.01□□□□□ -0.33
Ube2d3P61079 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.01□□□□□ -0.33
Ube2d3P61079 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Ube2d3P61079 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ube2d3P61079 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.01□□□□□ -0.33
Ube2d3P61079 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.01□□□□□ -0.33
Ube2d3P61079 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ube2d3P61079 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ube2d3P61079 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.01□□□□□ -0.33
Ube2d3P61079 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d3P61079 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d3P61079 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ube2d3P61079 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d3P61079 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d3P61079 Gm6598-201ENSMUST00000202719 2615 ntBASIC13□□□□□ -0.33
Ube2d3P61079 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d3P61079 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ube2d3P61079 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ube2d3P61079 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d3P61079 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ube2d3P61079 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ube2d3P61079 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ube2d3P61079 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Ube2d3P61079 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13□□□□□ -0.33
Ube2d3P61079 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d3P61079 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13□□□□□ -0.33
Ube2d3P61079 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13□□□□□ -0.33
Ube2d3P61079 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Ube2d3P61079 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d3P61079 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d3P61079 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ube2d3P61079 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d3P61079 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d3P61079 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ube2d3P61079 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ube2d3P61079 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d3P61079 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d3P61079 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d3P61079 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC12.99□□□□□ -0.33
Ube2d3P61079 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Ube2d3P61079 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d3P61079 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.99□□□□□ -0.33
Ube2d3P61079 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d3P61079 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d3P61079 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d3P61079 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d3P61079 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d3P61079 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d3P61079 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d3P61079 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12.99□□□□□ -0.33
Ube2d3P61079 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d3P61079 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ube2d3P61079 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ube2d3P61079 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d3P61079 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d3P61079 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d3P61079 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ube2d3P61079 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d3P61079 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d3P61079 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Ube2d3P61079 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d3P61079 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d3P61079 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ube2d3P61079 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC12.98□□□□□ -0.33
Ube2d3P61079 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.98□□□□□ -0.33
Ube2d3P61079 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d3P61079 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ube2d3P61079 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d3P61079 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d3P61079 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.98□□□□□ -0.33
Ube2d3P61079 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.98□□□□□ -0.33
Ube2d3P61079 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d3P61079 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d3P61079 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d3P61079 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Ube2d3P61079 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ube2d3P61079 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms