Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.3■□□□□ 0.84
Tpm1P58771 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.3■□□□□ 0.84
Tpm1P58771 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tpm1P58771 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Tpm1P58771 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Tpm1P58771 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.3■□□□□ 0.84
Tpm1P58771 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tpm1P58771 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tpm1P58771 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tpm1P58771 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.29■□□□□ 0.84
Tpm1P58771 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Tpm1P58771 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tpm1P58771 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tpm1P58771 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tpm1P58771 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Tpm1P58771 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tpm1P58771 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tpm1P58771 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tpm1P58771 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tpm1P58771 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tpm1P58771 Gm9847-201ENSMUST00000052528 599 ntBASIC20.29■□□□□ 0.84
Tpm1P58771 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tpm1P58771 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Tpm1P58771 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Tpm1P58771 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tpm1P58771 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tpm1P58771 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tpm1P58771 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tpm1P58771 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.28■□□□□ 0.84
Tpm1P58771 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.28■□□□□ 0.84
Tpm1P58771 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tpm1P58771 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tpm1P58771 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tpm1P58771 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tpm1P58771 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Tpm1P58771 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Tpm1P58771 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.28■□□□□ 0.84
Tpm1P58771 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tpm1P58771 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tpm1P58771 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.28■□□□□ 0.84
Tpm1P58771 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tpm1P58771 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tpm1P58771 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Tpm1P58771 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tpm1P58771 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tpm1P58771 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tpm1P58771 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tpm1P58771 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tpm1P58771 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Tpm1P58771 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tpm1P58771 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tpm1P58771 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tpm1P58771 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.27■□□□□ 0.84
Tpm1P58771 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tpm1P58771 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tpm1P58771 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Tpm1P58771 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tpm1P58771 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tpm1P58771 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tpm1P58771 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Tpm1P58771 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tpm1P58771 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.27■□□□□ 0.83
Tpm1P58771 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Tpm1P58771 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Tpm1P58771 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tpm1P58771 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tpm1P58771 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tpm1P58771 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tpm1P58771 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Tpm1P58771 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tpm1P58771 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tpm1P58771 Gm27801-201ENSMUST00000184174 223 ntBASIC20.26■□□□□ 0.83
Tpm1P58771 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tpm1P58771 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Tpm1P58771 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tpm1P58771 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tpm1P58771 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tpm1P58771 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tpm1P58771 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.26■□□□□ 0.83
Tpm1P58771 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tpm1P58771 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tpm1P58771 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tpm1P58771 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tpm1P58771 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tpm1P58771 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tpm1P58771 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tpm1P58771 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tpm1P58771 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Tpm1P58771 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tpm1P58771 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Tpm1P58771 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.25■□□□□ 0.83
Tpm1P58771 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Tpm1P58771 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tpm1P58771 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Tpm1P58771 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tpm1P58771 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tpm1P58771 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tpm1P58771 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tpm1P58771 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tpm1P58771 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms