Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.31■□□□□ 0.52
SmoP56726 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SmoP56726 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.31■□□□□ 0.52
SmoP56726 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SmoP56726 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SmoP56726 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SmoP56726 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SmoP56726 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SmoP56726 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SmoP56726 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SmoP56726 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SmoP56726 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SmoP56726 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.3■□□□□ 0.52
SmoP56726 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.3■□□□□ 0.52
SmoP56726 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.3■□□□□ 0.52
SmoP56726 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SmoP56726 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SmoP56726 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SmoP56726 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SmoP56726 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SmoP56726 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SmoP56726 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.29■□□□□ 0.52
SmoP56726 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SmoP56726 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.29■□□□□ 0.52
SmoP56726 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.29■□□□□ 0.52
SmoP56726 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SmoP56726 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SmoP56726 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SmoP56726 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SmoP56726 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SmoP56726 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.29■□□□□ 0.52
SmoP56726 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SmoP56726 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.28■□□□□ 0.52
SmoP56726 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SmoP56726 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SmoP56726 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SmoP56726 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SmoP56726 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SmoP56726 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.28■□□□□ 0.52
SmoP56726 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SmoP56726 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SmoP56726 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SmoP56726 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SmoP56726 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SmoP56726 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SmoP56726 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.28■□□□□ 0.52
SmoP56726 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SmoP56726 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SmoP56726 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SmoP56726 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SmoP56726 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SmoP56726 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SmoP56726 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SmoP56726 Gm10698-201ENSMUST00000182663 604 ntBASIC18.27■□□□□ 0.52
SmoP56726 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
SmoP56726 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SmoP56726 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SmoP56726 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SmoP56726 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SmoP56726 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SmoP56726 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SmoP56726 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SmoP56726 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SmoP56726 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SmoP56726 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SmoP56726 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SmoP56726 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SmoP56726 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.26■□□□□ 0.51
SmoP56726 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.26■□□□□ 0.51
SmoP56726 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.26■□□□□ 0.51
SmoP56726 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.26■□□□□ 0.51
SmoP56726 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SmoP56726 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SmoP56726 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SmoP56726 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SmoP56726 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SmoP56726 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SmoP56726 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SmoP56726 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SmoP56726 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SmoP56726 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.25■□□□□ 0.51
SmoP56726 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.25■□□□□ 0.51
SmoP56726 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.25■□□□□ 0.51
SmoP56726 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.25■□□□□ 0.51
SmoP56726 Gm10812-201ENSMUST00000099864 546 ntBASIC18.25■□□□□ 0.51
SmoP56726 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SmoP56726 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SmoP56726 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SmoP56726 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SmoP56726 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SmoP56726 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
SmoP56726 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SmoP56726 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SmoP56726 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SmoP56726 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.24■□□□□ 0.51
SmoP56726 Gm10138-203ENSMUST00000206952 366 ntBASIC18.24■□□□□ 0.51
SmoP56726 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.24■□□□□ 0.51
SmoP56726 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SmoP56726 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SmoP56726 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms