Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm13559-201ENSMUST00000120476 863 ntBASIC18.03■□□□□ 0.48
Atxn1P54254 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn1P54254 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn1P54254 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn1P54254 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn1P54254 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn1P54254 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn1P54254 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atxn1P54254 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.02■□□□□ 0.48
Atxn1P54254 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atxn1P54254 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atxn1P54254 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atxn1P54254 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.02■□□□□ 0.48
Atxn1P54254 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atxn1P54254 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.02■□□□□ 0.48
Atxn1P54254 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atxn1P54254 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atxn1P54254 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atxn1P54254 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Atxn1P54254 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Atxn1P54254 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atxn1P54254 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atxn1P54254 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atxn1P54254 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.01■□□□□ 0.47
Atxn1P54254 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atxn1P54254 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atxn1P54254 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atxn1P54254 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atxn1P54254 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atxn1P54254 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atxn1P54254 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.01■□□□□ 0.47
Atxn1P54254 Gm21814-202ENSMUST00000203277 873 ntBASIC18.01■□□□□ 0.47
Atxn1P54254 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atxn1P54254 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atxn1P54254 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atxn1P54254 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atxn1P54254 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atxn1P54254 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18■□□□□ 0.47
Atxn1P54254 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atxn1P54254 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atxn1P54254 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Atxn1P54254 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Atxn1P54254 Gm5112-201ENSMUST00000204407 2368 ntBASIC18■□□□□ 0.47
Atxn1P54254 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18■□□□□ 0.47
Atxn1P54254 Gm11539-201ENSMUST00000119837 557 ntBASIC18■□□□□ 0.47
Atxn1P54254 Gm13436-201ENSMUST00000120418 567 ntBASIC18■□□□□ 0.47
Atxn1P54254 Gm7889-201ENSMUST00000185591 958 ntBASIC18■□□□□ 0.47
Atxn1P54254 Arhgef4-208ENSMUST00000211073 171 ntBASIC18■□□□□ 0.47
Atxn1P54254 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Atxn1P54254 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atxn1P54254 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atxn1P54254 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Atxn1P54254 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Atxn1P54254 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Atxn1P54254 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.99■□□□□ 0.47
Atxn1P54254 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.99■□□□□ 0.47
Atxn1P54254 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.99■□□□□ 0.47
Atxn1P54254 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.99■□□□□ 0.47
Atxn1P54254 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.99■□□□□ 0.47
Atxn1P54254 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atxn1P54254 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Atxn1P54254 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.99■□□□□ 0.47
Atxn1P54254 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atxn1P54254 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atxn1P54254 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atxn1P54254 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atxn1P54254 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atxn1P54254 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Atxn1P54254 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atxn1P54254 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atxn1P54254 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atxn1P54254 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atxn1P54254 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Atxn1P54254 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Atxn1P54254 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Atxn1P54254 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atxn1P54254 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Atxn1P54254 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atxn1P54254 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atxn1P54254 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atxn1P54254 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Atxn1P54254 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atxn1P54254 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atxn1P54254 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Atxn1P54254 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atxn1P54254 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.97■□□□□ 0.47
Atxn1P54254 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atxn1P54254 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.97■□□□□ 0.47
Atxn1P54254 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atxn1P54254 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atxn1P54254 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atxn1P54254 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atxn1P54254 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.97■□□□□ 0.47
Atxn1P54254 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Atxn1P54254 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Atxn1P54254 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Atxn1P54254 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atxn1P54254 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atxn1P54254 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atxn1P54254 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms