Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lbx1P52955 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lbx1P52955 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.61■□□□□ 0.41
Lbx1P52955 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lbx1P52955 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lbx1P52955 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lbx1P52955 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lbx1P52955 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.61■□□□□ 0.41
Lbx1P52955 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lbx1P52955 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lbx1P52955 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lbx1P52955 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lbx1P52955 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.6■□□□□ 0.41
Lbx1P52955 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.6■□□□□ 0.41
Lbx1P52955 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.6■□□□□ 0.41
Lbx1P52955 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lbx1P52955 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lbx1P52955 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lbx1P52955 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lbx1P52955 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lbx1P52955 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Lbx1P52955 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lbx1P52955 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Lbx1P52955 Gm16061-201ENSMUST00000122167 857 ntBASIC17.59■□□□□ 0.41
Lbx1P52955 Gm11452-201ENSMUST00000122376 690 ntBASIC17.59■□□□□ 0.41
Lbx1P52955 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Lbx1P52955 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lbx1P52955 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lbx1P52955 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Lbx1P52955 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Lbx1P52955 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lbx1P52955 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.59■□□□□ 0.41
Lbx1P52955 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lbx1P52955 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.59■□□□□ 0.41
Lbx1P52955 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lbx1P52955 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lbx1P52955 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.59■□□□□ 0.41
Lbx1P52955 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lbx1P52955 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lbx1P52955 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lbx1P52955 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lbx1P52955 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lbx1P52955 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lbx1P52955 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lbx1P52955 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lbx1P52955 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lbx1P52955 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lbx1P52955 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.58■□□□□ 0.4
Lbx1P52955 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.58■□□□□ 0.4
Lbx1P52955 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.58■□□□□ 0.4
Lbx1P52955 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lbx1P52955 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lbx1P52955 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lbx1P52955 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lbx1P52955 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lbx1P52955 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Lbx1P52955 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Lbx1P52955 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Lbx1P52955 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lbx1P52955 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lbx1P52955 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lbx1P52955 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.57■□□□□ 0.4
Lbx1P52955 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lbx1P52955 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lbx1P52955 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.57■□□□□ 0.4
Lbx1P52955 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lbx1P52955 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lbx1P52955 Gm27459-201ENSMUST00000184860 107 ntBASIC17.57■□□□□ 0.4
Lbx1P52955 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lbx1P52955 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lbx1P52955 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Lbx1P52955 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lbx1P52955 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lbx1P52955 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lbx1P52955 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lbx1P52955 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lbx1P52955 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Lbx1P52955 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lbx1P52955 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lbx1P52955 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lbx1P52955 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lbx1P52955 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lbx1P52955 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lbx1P52955 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lbx1P52955 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lbx1P52955 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lbx1P52955 Gm6623-201ENSMUST00000173570 544 ntBASIC17.56■□□□□ 0.4
Lbx1P52955 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Lbx1P52955 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.56■□□□□ 0.4
Lbx1P52955 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lbx1P52955 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lbx1P52955 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Lbx1P52955 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Lbx1P52955 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lbx1P52955 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lbx1P52955 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lbx1P52955 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lbx1P52955 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Lbx1P52955 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lbx1P52955 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms