Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Pdx1P52946 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pdx1P52946 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdx1P52946 Gm4968-201ENSMUST00000071458 858 ntBASIC17.98■□□□□ 0.47
Pdx1P52946 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pdx1P52946 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdx1P52946 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.98■□□□□ 0.47
Pdx1P52946 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pdx1P52946 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.98■□□□□ 0.47
Pdx1P52946 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdx1P52946 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdx1P52946 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdx1P52946 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdx1P52946 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pdx1P52946 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdx1P52946 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pdx1P52946 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdx1P52946 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.97■□□□□ 0.47
Pdx1P52946 Gm44549-201ENSMUST00000208351 577 ntBASIC17.97■□□□□ 0.47
Pdx1P52946 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdx1P52946 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.97■□□□□ 0.47
Pdx1P52946 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdx1P52946 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdx1P52946 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pdx1P52946 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdx1P52946 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdx1P52946 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdx1P52946 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdx1P52946 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdx1P52946 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdx1P52946 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdx1P52946 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdx1P52946 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdx1P52946 Fst-202ENSMUST00000223640 2612 ntBASIC17.96■□□□□ 0.47
Pdx1P52946 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdx1P52946 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pdx1P52946 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdx1P52946 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.96■□□□□ 0.47
Pdx1P52946 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.96■□□□□ 0.47
Pdx1P52946 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdx1P52946 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdx1P52946 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pdx1P52946 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdx1P52946 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdx1P52946 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Pdx1P52946 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pdx1P52946 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pdx1P52946 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pdx1P52946 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.95■□□□□ 0.46
Pdx1P52946 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdx1P52946 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pdx1P52946 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Pdx1P52946 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdx1P52946 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdx1P52946 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Pdx1P52946 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.95■□□□□ 0.46
Pdx1P52946 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdx1P52946 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.95■□□□□ 0.46
Pdx1P52946 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Pdx1P52946 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pdx1P52946 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pdx1P52946 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdx1P52946 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Pdx1P52946 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdx1P52946 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pdx1P52946 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Pdx1P52946 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.95■□□□□ 0.46
Pdx1P52946 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.94■□□□□ 0.46
Pdx1P52946 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdx1P52946 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pdx1P52946 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.94■□□□□ 0.46
Pdx1P52946 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.94■□□□□ 0.46
Pdx1P52946 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.94■□□□□ 0.46
Pdx1P52946 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdx1P52946 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdx1P52946 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdx1P52946 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdx1P52946 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdx1P52946 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdx1P52946 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pdx1P52946 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pdx1P52946 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.94■□□□□ 0.46
Pdx1P52946 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdx1P52946 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdx1P52946 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdx1P52946 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdx1P52946 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdx1P52946 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Pdx1P52946 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.93■□□□□ 0.46
Pdx1P52946 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.93■□□□□ 0.46
Pdx1P52946 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pdx1P52946 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.93■□□□□ 0.46
Pdx1P52946 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pdx1P52946 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.93■□□□□ 0.46
Pdx1P52946 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.93■□□□□ 0.46
Pdx1P52946 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdx1P52946 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdx1P52946 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdx1P52946 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdx1P52946 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms