Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CcnfP51944 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CcnfP51944 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CcnfP51944 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CcnfP51944 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CcnfP51944 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CcnfP51944 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CcnfP51944 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CcnfP51944 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CcnfP51944 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CcnfP51944 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CcnfP51944 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.33■□□□□ 0.36
CcnfP51944 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.33■□□□□ 0.36
CcnfP51944 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CcnfP51944 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CcnfP51944 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.33■□□□□ 0.36
CcnfP51944 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CcnfP51944 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CcnfP51944 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CcnfP51944 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.33■□□□□ 0.36
CcnfP51944 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcnfP51944 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CcnfP51944 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.32■□□□□ 0.36
CcnfP51944 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcnfP51944 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcnfP51944 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.32■□□□□ 0.36
CcnfP51944 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CcnfP51944 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcnfP51944 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CcnfP51944 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CcnfP51944 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcnfP51944 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcnfP51944 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CcnfP51944 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcnfP51944 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcnfP51944 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcnfP51944 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.31■□□□□ 0.36
CcnfP51944 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcnfP51944 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CcnfP51944 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcnfP51944 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcnfP51944 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcnfP51944 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CcnfP51944 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcnfP51944 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnfP51944 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnfP51944 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnfP51944 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CcnfP51944 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnfP51944 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CcnfP51944 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.3■□□□□ 0.36
CcnfP51944 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnfP51944 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnfP51944 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.3■□□□□ 0.36
CcnfP51944 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnfP51944 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnfP51944 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CcnfP51944 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnfP51944 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.3■□□□□ 0.36
CcnfP51944 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnfP51944 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcnfP51944 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CcnfP51944 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.29■□□□□ 0.36
CcnfP51944 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcnfP51944 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.29■□□□□ 0.36
CcnfP51944 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.29■□□□□ 0.36
CcnfP51944 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcnfP51944 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CcnfP51944 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CcnfP51944 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CcnfP51944 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CcnfP51944 Gm43173-201ENSMUST00000202246 593 ntBASIC17.29■□□□□ 0.36
CcnfP51944 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcnfP51944 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.29■□□□□ 0.36
CcnfP51944 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcnfP51944 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcnfP51944 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.29■□□□□ 0.36
CcnfP51944 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcnfP51944 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcnfP51944 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcnfP51944 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcnfP51944 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
CcnfP51944 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcnfP51944 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.28■□□□□ 0.36
CcnfP51944 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.28■□□□□ 0.36
CcnfP51944 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CcnfP51944 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.28■□□□□ 0.36
CcnfP51944 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CcnfP51944 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CcnfP51944 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CcnfP51944 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.28■□□□□ 0.36
CcnfP51944 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.28■□□□□ 0.36
CcnfP51944 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CcnfP51944 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CcnfP51944 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CcnfP51944 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CcnfP51944 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CcnfP51944 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CcnfP51944 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CcnfP51944 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms