Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SftpbP50405 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.63■□□□□ 0.57
SftpbP50405 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.63■□□□□ 0.57
SftpbP50405 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.63■□□□□ 0.57
SftpbP50405 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SftpbP50405 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SftpbP50405 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SftpbP50405 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SftpbP50405 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.63■□□□□ 0.57
SftpbP50405 Reep4-203ENSMUST00000226563 1444 ntBASIC18.63■□□□□ 0.57
SftpbP50405 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SftpbP50405 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SftpbP50405 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SftpbP50405 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.63■□□□□ 0.57
SftpbP50405 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SftpbP50405 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SftpbP50405 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpbP50405 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpbP50405 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpbP50405 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
SftpbP50405 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpbP50405 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpbP50405 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpbP50405 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
SftpbP50405 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpbP50405 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpbP50405 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SftpbP50405 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SftpbP50405 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SftpbP50405 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpbP50405 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpbP50405 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpbP50405 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.61■□□□□ 0.57
SftpbP50405 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.61■□□□□ 0.57
SftpbP50405 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpbP50405 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpbP50405 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpbP50405 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpbP50405 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpbP50405 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SftpbP50405 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SftpbP50405 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SftpbP50405 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
SftpbP50405 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SftpbP50405 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SftpbP50405 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SftpbP50405 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.6■□□□□ 0.57
SftpbP50405 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.6■□□□□ 0.57
SftpbP50405 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SftpbP50405 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SftpbP50405 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SftpbP50405 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SftpbP50405 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.6■□□□□ 0.57
SftpbP50405 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SftpbP50405 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SftpbP50405 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SftpbP50405 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SftpbP50405 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.59■□□□□ 0.57
SftpbP50405 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SftpbP50405 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SftpbP50405 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SftpbP50405 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
SftpbP50405 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SftpbP50405 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SftpbP50405 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SftpbP50405 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SftpbP50405 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SftpbP50405 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.59■□□□□ 0.57
SftpbP50405 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SftpbP50405 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SftpbP50405 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SftpbP50405 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SftpbP50405 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SftpbP50405 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SftpbP50405 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SftpbP50405 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SftpbP50405 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SftpbP50405 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SftpbP50405 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SftpbP50405 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SftpbP50405 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SftpbP50405 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SftpbP50405 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SftpbP50405 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.58■□□□□ 0.56
SftpbP50405 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.58■□□□□ 0.56
SftpbP50405 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SftpbP50405 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SftpbP50405 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SftpbP50405 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SftpbP50405 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SftpbP50405 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SftpbP50405 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SftpbP50405 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
SftpbP50405 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SftpbP50405 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SftpbP50405 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SftpbP50405 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.57■□□□□ 0.56
SftpbP50405 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SftpbP50405 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SftpbP50405 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms