Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Reep4-203ENSMUST00000226563 1444 ntBASIC17.73■□□□□ 0.43
Gli1P47806 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.73■□□□□ 0.43
Gli1P47806 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli1P47806 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gli1P47806 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli1P47806 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli1P47806 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.73■□□□□ 0.43
Gli1P47806 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.73■□□□□ 0.43
Gli1P47806 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli1P47806 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.73■□□□□ 0.43
Gli1P47806 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gli1P47806 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.73■□□□□ 0.43
Gli1P47806 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli1P47806 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli1P47806 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
Gli1P47806 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gli1P47806 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gli1P47806 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gli1P47806 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gli1P47806 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gli1P47806 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.72■□□□□ 0.43
Gli1P47806 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gli1P47806 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gli1P47806 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gli1P47806 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.72■□□□□ 0.43
Gli1P47806 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Gli1P47806 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gli1P47806 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gli1P47806 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gli1P47806 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gli1P47806 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gli1P47806 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.71■□□□□ 0.43
Gli1P47806 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gli1P47806 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Gli1P47806 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gli1P47806 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gli1P47806 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.71■□□□□ 0.43
Gli1P47806 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gli1P47806 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Gli1P47806 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gli1P47806 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.71■□□□□ 0.43
Gli1P47806 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gli1P47806 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gli1P47806 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gli1P47806 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gli1P47806 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gli1P47806 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.7■□□□□ 0.42
Gli1P47806 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.7■□□□□ 0.42
Gli1P47806 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gli1P47806 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.7■□□□□ 0.42
Gli1P47806 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Gli1P47806 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gli1P47806 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.7■□□□□ 0.42
Gli1P47806 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gli1P47806 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gli1P47806 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gli1P47806 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gli1P47806 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gli1P47806 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.69■□□□□ 0.42
Gli1P47806 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.69■□□□□ 0.42
Gli1P47806 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Gli1P47806 Gm7514-201ENSMUST00000209475 934 ntBASIC17.69■□□□□ 0.42
Gli1P47806 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.69■□□□□ 0.42
Gli1P47806 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gli1P47806 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Gli1P47806 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Gli1P47806 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gli1P47806 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli1P47806 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli1P47806 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gli1P47806 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gli1P47806 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli1P47806 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli1P47806 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli1P47806 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli1P47806 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli1P47806 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gli1P47806 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gli1P47806 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Gli1P47806 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Gli1P47806 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gli1P47806 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Gli1P47806 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gli1P47806 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gli1P47806 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gli1P47806 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Gli1P47806 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gli1P47806 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gli1P47806 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gli1P47806 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.67■□□□□ 0.42
Gli1P47806 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gli1P47806 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gli1P47806 Gm7860-201ENSMUST00000121190 879 ntBASIC17.66■□□□□ 0.42
Gli1P47806 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.66■□□□□ 0.42
Gli1P47806 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.66■□□□□ 0.42
Gli1P47806 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gli1P47806 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gli1P47806 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gli1P47806 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gli1P47806 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms