Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps4bP46467 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Vps4bP46467 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vps4bP46467 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Vps4bP46467 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Vps4bP46467 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Vps4bP46467 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Vps4bP46467 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps4bP46467 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps4bP46467 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps4bP46467 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps4bP46467 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps4bP46467 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.47■□□□□ 0.55
Vps4bP46467 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps4bP46467 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps4bP46467 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps4bP46467 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Vps4bP46467 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.47■□□□□ 0.55
Vps4bP46467 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Vps4bP46467 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps4bP46467 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps4bP46467 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps4bP46467 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Vps4bP46467 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps4bP46467 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Vps4bP46467 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps4bP46467 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps4bP46467 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.46■□□□□ 0.55
Vps4bP46467 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Vps4bP46467 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps4bP46467 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vps4bP46467 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Vps4bP46467 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.45■□□□□ 0.54
Vps4bP46467 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Vps4bP46467 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.45■□□□□ 0.54
Vps4bP46467 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.45■□□□□ 0.54
Vps4bP46467 Gm10493-201ENSMUST00000097270 612 ntBASIC18.45■□□□□ 0.54
Vps4bP46467 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps4bP46467 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps4bP46467 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps4bP46467 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4bP46467 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.44■□□□□ 0.54
Vps4bP46467 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4bP46467 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4bP46467 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4bP46467 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4bP46467 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4bP46467 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4bP46467 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4bP46467 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Vps4bP46467 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4bP46467 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4bP46467 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4bP46467 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4bP46467 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4bP46467 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4bP46467 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.43■□□□□ 0.54
Vps4bP46467 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps4bP46467 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps4bP46467 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps4bP46467 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps4bP46467 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.43■□□□□ 0.54
Vps4bP46467 Gm42778-201ENSMUST00000199644 553 ntBASIC18.43■□□□□ 0.54
Vps4bP46467 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vps4bP46467 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.43■□□□□ 0.54
Vps4bP46467 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.42■□□□□ 0.54
Vps4bP46467 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps4bP46467 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Vps4bP46467 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps4bP46467 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps4bP46467 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps4bP46467 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Vps4bP46467 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps4bP46467 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.42■□□□□ 0.54
Vps4bP46467 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.42■□□□□ 0.54
Vps4bP46467 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps4bP46467 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.42■□□□□ 0.54
Vps4bP46467 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps4bP46467 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps4bP46467 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps4bP46467 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Vps4bP46467 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vps4bP46467 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps4bP46467 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Vps4bP46467 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps4bP46467 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vps4bP46467 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.41■□□□□ 0.54
Vps4bP46467 Gm42642-201ENSMUST00000200683 355 ntBASIC18.41■□□□□ 0.54
Vps4bP46467 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vps4bP46467 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps4bP46467 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Vps4bP46467 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps4bP46467 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Vps4bP46467 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps4bP46467 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps4bP46467 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.41■□□□□ 0.54
Vps4bP46467 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps4bP46467 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps4bP46467 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps4bP46467 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms