Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-6P43688 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-6P43688 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.18■□□□□ 0.34
Nkx2-6P43688 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-6P43688 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.18■□□□□ 0.34
Nkx2-6P43688 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-6P43688 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-6P43688 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-6P43688 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.18■□□□□ 0.34
Nkx2-6P43688 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-6P43688 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-6P43688 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
Nkx2-6P43688 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-6P43688 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-6P43688 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-6P43688 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.17■□□□□ 0.34
Nkx2-6P43688 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-6P43688 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nkx2-6P43688 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Gm7977-201ENSMUST00000193787 748 ntBASIC17.16■□□□□ 0.34
Nkx2-6P43688 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.16■□□□□ 0.34
Nkx2-6P43688 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.16■□□□□ 0.34
Nkx2-6P43688 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.16■□□□□ 0.34
Nkx2-6P43688 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-6P43688 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-6P43688 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.15■□□□□ 0.34
Nkx2-6P43688 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-6P43688 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-6P43688 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-6P43688 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-6P43688 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nkx2-6P43688 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-6P43688 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-6P43688 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-6P43688 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nkx2-6P43688 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-6P43688 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-6P43688 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nkx2-6P43688 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nkx2-6P43688 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Nkx2-6P43688 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nkx2-6P43688 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-6P43688 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Nkx2-6P43688 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-6P43688 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-6P43688 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-6P43688 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.14■□□□□ 0.33
Nkx2-6P43688 Gm37055-201ENSMUST00000191866 133 ntBASIC17.14■□□□□ 0.33
Nkx2-6P43688 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.14■□□□□ 0.33
Nkx2-6P43688 Gm10138-203ENSMUST00000206952 366 ntBASIC17.14■□□□□ 0.33
Nkx2-6P43688 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-6P43688 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-6P43688 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Nkx2-6P43688 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-6P43688 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-6P43688 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-6P43688 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-6P43688 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-6P43688 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nkx2-6P43688 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Nkx2-6P43688 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-6P43688 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-6P43688 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-6P43688 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nkx2-6P43688 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.13■□□□□ 0.33
Nkx2-6P43688 Gm13836-201ENSMUST00000121159 501 ntBASIC17.13■□□□□ 0.33
Nkx2-6P43688 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.13■□□□□ 0.33
Nkx2-6P43688 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-6P43688 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Nkx2-6P43688 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.13■□□□□ 0.33
Nkx2-6P43688 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.13■□□□□ 0.33
Nkx2-6P43688 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-6P43688 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-6P43688 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-6P43688 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-6P43688 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-6P43688 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-6P43688 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-6P43688 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-6P43688 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms