Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cd9P40240 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cd9P40240 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cd9P40240 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cd9P40240 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
Cd9P40240 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd9P40240 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd9P40240 Fst-202ENSMUST00000223640 2612 ntBASIC17.97■□□□□ 0.47
Cd9P40240 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.97■□□□□ 0.47
Cd9P40240 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.97■□□□□ 0.47
Cd9P40240 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cd9P40240 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cd9P40240 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.97■□□□□ 0.47
Cd9P40240 Rab3c-203ENSMUST00000224180 967 ntBASIC17.97■□□□□ 0.47
Cd9P40240 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd9P40240 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cd9P40240 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd9P40240 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd9P40240 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd9P40240 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cd9P40240 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
Cd9P40240 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd9P40240 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd9P40240 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cd9P40240 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cd9P40240 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.96■□□□□ 0.47
Cd9P40240 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd9P40240 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cd9P40240 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cd9P40240 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.96■□□□□ 0.47
Cd9P40240 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd9P40240 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cd9P40240 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd9P40240 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cd9P40240 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd9P40240 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cd9P40240 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.95■□□□□ 0.46
Cd9P40240 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Cd9P40240 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd9P40240 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd9P40240 Gm2399-201ENSMUST00000104944 225 ntBASIC17.95■□□□□ 0.46
Cd9P40240 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Cd9P40240 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.95■□□□□ 0.46
Cd9P40240 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd9P40240 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd9P40240 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.95■□□□□ 0.46
Cd9P40240 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.95■□□□□ 0.46
Cd9P40240 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cd9P40240 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cd9P40240 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd9P40240 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd9P40240 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cd9P40240 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cd9P40240 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.95■□□□□ 0.46
Cd9P40240 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd9P40240 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd9P40240 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.94■□□□□ 0.46
Cd9P40240 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cd9P40240 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd9P40240 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cd9P40240 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Cd9P40240 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.94■□□□□ 0.46
Cd9P40240 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.94■□□□□ 0.46
Cd9P40240 Gm8969-201ENSMUST00000199694 526 ntBASIC17.94■□□□□ 0.46
Cd9P40240 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd9P40240 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd9P40240 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd9P40240 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd9P40240 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd9P40240 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Cd9P40240 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd9P40240 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd9P40240 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd9P40240 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.93■□□□□ 0.46
Cd9P40240 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.93■□□□□ 0.46
Cd9P40240 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.93■□□□□ 0.46
Cd9P40240 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cd9P40240 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd9P40240 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd9P40240 Zfp783-201ENSMUST00000095946 670 ntBASIC17.93■□□□□ 0.46
Cd9P40240 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cd9P40240 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cd9P40240 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cd9P40240 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cd9P40240 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.93■□□□□ 0.46
Cd9P40240 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd9P40240 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd9P40240 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd9P40240 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd9P40240 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd9P40240 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.92■□□□□ 0.46
Cd9P40240 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cd9P40240 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cd9P40240 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd9P40240 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd9P40240 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd9P40240 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd9P40240 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd9P40240 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cd9P40240 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms