Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Timp3P39876 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Timp3P39876 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Timp3P39876 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Timp3P39876 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Timp3P39876 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Timp3P39876 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Timp3P39876 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Timp3P39876 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Timp3P39876 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Timp3P39876 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Timp3P39876 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.86□□□□□ -0.03
Timp3P39876 Gm37856-201ENSMUST00000191634 999 ntBASIC14.86□□□□□ -0.03
Timp3P39876 Trmt13-210ENSMUST00000198454 880 ntBASIC14.86□□□□□ -0.03
Timp3P39876 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Timp3P39876 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Timp3P39876 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Timp3P39876 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Timp3P39876 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.86□□□□□ -0.03
Timp3P39876 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Timp3P39876 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Timp3P39876 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Timp3P39876 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.86□□□□□ -0.03
Timp3P39876 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Timp3P39876 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Timp3P39876 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Timp3P39876 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Timp3P39876 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Timp3P39876 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Timp3P39876 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.85□□□□□ -0.03
Timp3P39876 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Timp3P39876 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Timp3P39876 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Timp3P39876 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Timp3P39876 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.85□□□□□ -0.03
Timp3P39876 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Timp3P39876 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Timp3P39876 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Timp3P39876 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Timp3P39876 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Timp3P39876 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Timp3P39876 BC021767-201ENSMUST00000126387 1716 ntBASIC14.84□□□□□ -0.03
Timp3P39876 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Timp3P39876 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.84□□□□□ -0.03
Timp3P39876 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.84□□□□□ -0.03
Timp3P39876 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.84□□□□□ -0.03
Timp3P39876 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Timp3P39876 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Timp3P39876 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Timp3P39876 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Timp3P39876 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Timp3P39876 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Timp3P39876 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Timp3P39876 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Timp3P39876 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Timp3P39876 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Timp3P39876 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.83□□□□□ -0.03
Timp3P39876 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Timp3P39876 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Timp3P39876 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Timp3P39876 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Timp3P39876 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Timp3P39876 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Timp3P39876 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Timp3P39876 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Timp3P39876 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Timp3P39876 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Timp3P39876 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.83□□□□□ -0.04
Timp3P39876 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Timp3P39876 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Timp3P39876 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Timp3P39876 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Timp3P39876 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Timp3P39876 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Timp3P39876 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Timp3P39876 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Timp3P39876 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.82□□□□□ -0.04
Timp3P39876 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.82□□□□□ -0.04
Timp3P39876 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.82□□□□□ -0.04
Timp3P39876 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.82□□□□□ -0.04
Timp3P39876 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.82□□□□□ -0.04
Timp3P39876 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.82□□□□□ -0.04
Timp3P39876 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Timp3P39876 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Timp3P39876 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Timp3P39876 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Timp3P39876 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Timp3P39876 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Timp3P39876 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Timp3P39876 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.82□□□□□ -0.04
Timp3P39876 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Timp3P39876 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Timp3P39876 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Timp3P39876 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Timp3P39876 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Timp3P39876 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Timp3P39876 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Timp3P39876 Gm2559-201ENSMUST00000201323 363 ntBASIC14.81□□□□□ -0.04
Timp3P39876 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.81□□□□□ -0.04
Timp3P39876 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms