Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh4P39038 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh4P39038 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Cdh4P39038 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh4P39038 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cdh4P39038 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh4P39038 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh4P39038 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh4P39038 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh4P39038 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.4■□□□□ 0.38
Cdh4P39038 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh4P39038 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cdh4P39038 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh4P39038 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh4P39038 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cdh4P39038 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh4P39038 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cdh4P39038 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh4P39038 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cdh4P39038 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh4P39038 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cdh4P39038 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.39■□□□□ 0.37
Cdh4P39038 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.39■□□□□ 0.37
Cdh4P39038 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh4P39038 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh4P39038 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.39■□□□□ 0.37
Cdh4P39038 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh4P39038 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh4P39038 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cdh4P39038 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cdh4P39038 Golph3-205ENSMUST00000228671 2842 ntBASIC17.39■□□□□ 0.37
Cdh4P39038 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cdh4P39038 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh4P39038 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh4P39038 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh4P39038 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cdh4P39038 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh4P39038 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh4P39038 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
Cdh4P39038 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh4P39038 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cdh4P39038 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh4P39038 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh4P39038 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh4P39038 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.38■□□□□ 0.37
Cdh4P39038 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh4P39038 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.38■□□□□ 0.37
Cdh4P39038 Gm44549-201ENSMUST00000208351 577 ntBASIC17.38■□□□□ 0.37
Cdh4P39038 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.38■□□□□ 0.37
Cdh4P39038 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh4P39038 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh4P39038 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh4P39038 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh4P39038 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh4P39038 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh4P39038 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh4P39038 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cdh4P39038 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh4P39038 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh4P39038 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh4P39038 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh4P39038 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh4P39038 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.37■□□□□ 0.37
Cdh4P39038 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh4P39038 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh4P39038 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh4P39038 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cdh4P39038 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh4P39038 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh4P39038 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh4P39038 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh4P39038 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.37■□□□□ 0.37
Cdh4P39038 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cdh4P39038 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh4P39038 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh4P39038 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh4P39038 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.36■□□□□ 0.37
Cdh4P39038 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cdh4P39038 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh4P39038 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.36■□□□□ 0.37
Cdh4P39038 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.36■□□□□ 0.37
Cdh4P39038 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cdh4P39038 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh4P39038 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cdh4P39038 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.36■□□□□ 0.37
Cdh4P39038 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh4P39038 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh4P39038 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh4P39038 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cdh4P39038 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh4P39038 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh4P39038 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh4P39038 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh4P39038 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh4P39038 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh4P39038 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh4P39038 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cdh4P39038 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.35■□□□□ 0.37
Cdh4P39038 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.35■□□□□ 0.37
Cdh4P39038 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms