Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
RetP35546 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RetP35546 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RetP35546 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RetP35546 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.01■□□□□ 0.31
RetP35546 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.01■□□□□ 0.31
RetP35546 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.01■□□□□ 0.31
RetP35546 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RetP35546 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RetP35546 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RetP35546 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RetP35546 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RetP35546 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RetP35546 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RetP35546 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RetP35546 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RetP35546 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RetP35546 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RetP35546 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RetP35546 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RetP35546 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RetP35546 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RetP35546 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RetP35546 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RetP35546 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17■□□□□ 0.31
RetP35546 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17■□□□□ 0.31
RetP35546 Gm45906-201ENSMUST00000208911 1430 ntBASIC17■□□□□ 0.31
RetP35546 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RetP35546 Rab3c-203ENSMUST00000224180 967 ntBASIC17■□□□□ 0.31
RetP35546 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RetP35546 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RetP35546 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RetP35546 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RetP35546 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RetP35546 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RetP35546 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RetP35546 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17■□□□□ 0.31
RetP35546 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RetP35546 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RetP35546 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RetP35546 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RetP35546 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RetP35546 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RetP35546 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.99■□□□□ 0.31
RetP35546 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RetP35546 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RetP35546 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.99■□□□□ 0.31
RetP35546 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.99■□□□□ 0.31
RetP35546 Gm26524-201ENSMUST00000192339 390 ntBASIC16.99■□□□□ 0.31
RetP35546 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RetP35546 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RetP35546 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RetP35546 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RetP35546 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RetP35546 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RetP35546 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RetP35546 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RetP35546 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RetP35546 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RetP35546 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.98■□□□□ 0.31
RetP35546 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RetP35546 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RetP35546 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RetP35546 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RetP35546 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RetP35546 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RetP35546 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RetP35546 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RetP35546 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RetP35546 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RetP35546 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.98■□□□□ 0.31
RetP35546 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RetP35546 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RetP35546 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.98■□□□□ 0.31
RetP35546 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.97■□□□□ 0.31
RetP35546 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RetP35546 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RetP35546 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RetP35546 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RetP35546 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
RetP35546 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.97■□□□□ 0.31
RetP35546 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RetP35546 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RetP35546 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RetP35546 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RetP35546 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RetP35546 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RetP35546 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.96■□□□□ 0.31
RetP35546 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RetP35546 Gm13836-201ENSMUST00000121159 501 ntBASIC16.96■□□□□ 0.31
RetP35546 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RetP35546 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
RetP35546 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.96■□□□□ 0.31
RetP35546 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RetP35546 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RetP35546 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RetP35546 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RetP35546 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RetP35546 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RetP35546 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms