Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.61■□□□□ 0.57
Mmp13P33435 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp13P33435 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp13P33435 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp13P33435 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp13P33435 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp13P33435 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp13P33435 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp13P33435 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp13P33435 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.6■□□□□ 0.57
Mmp13P33435 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Mmp13P33435 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.6■□□□□ 0.57
Mmp13P33435 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.6■□□□□ 0.57
Mmp13P33435 Gm7514-201ENSMUST00000209475 934 ntBASIC18.6■□□□□ 0.57
Mmp13P33435 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Mmp13P33435 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.6■□□□□ 0.57
Mmp13P33435 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp13P33435 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp13P33435 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Mmp13P33435 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp13P33435 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Mmp13P33435 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp13P33435 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp13P33435 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp13P33435 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp13P33435 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp13P33435 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp13P33435 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp13P33435 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.59■□□□□ 0.57
Mmp13P33435 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp13P33435 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp13P33435 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp13P33435 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp13P33435 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.59■□□□□ 0.57
Mmp13P33435 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.59■□□□□ 0.57
Mmp13P33435 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp13P33435 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp13P33435 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp13P33435 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp13P33435 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp13P33435 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Mmp13P33435 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mmp13P33435 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mmp13P33435 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mmp13P33435 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mmp13P33435 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Mmp13P33435 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp13P33435 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp13P33435 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp13P33435 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.58■□□□□ 0.56
Mmp13P33435 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp13P33435 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Mmp13P33435 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp13P33435 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp13P33435 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp13P33435 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp13P33435 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Mmp13P33435 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp13P33435 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.58■□□□□ 0.56
Mmp13P33435 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Mmp13P33435 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Mmp13P33435 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.57■□□□□ 0.56
Mmp13P33435 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp13P33435 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp13P33435 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp13P33435 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Mmp13P33435 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp13P33435 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp13P33435 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp13P33435 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.57■□□□□ 0.56
Mmp13P33435 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp13P33435 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp13P33435 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp13P33435 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp13P33435 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp13P33435 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.57■□□□□ 0.56
Mmp13P33435 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp13P33435 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp13P33435 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp13P33435 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp13P33435 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp13P33435 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp13P33435 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp13P33435 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp13P33435 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp13P33435 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp13P33435 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.56■□□□□ 0.56
Mmp13P33435 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp13P33435 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp13P33435 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp13P33435 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.56■□□□□ 0.56
Mmp13P33435 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp13P33435 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp13P33435 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Mmp13P33435 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.56■□□□□ 0.56
Mmp13P33435 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp13P33435 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp13P33435 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Mmp13P33435 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp13P33435 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms