Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a11P31650 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a11P31650 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Slc6a11P31650 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.24■□□□□ 0.35
Slc6a11P31650 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a11P31650 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.24■□□□□ 0.35
Slc6a11P31650 Fst-202ENSMUST00000223640 2612 ntBASIC17.24■□□□□ 0.35
Slc6a11P31650 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a11P31650 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a11P31650 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Slc6a11P31650 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Slc6a11P31650 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a11P31650 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Slc6a11P31650 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a11P31650 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Slc6a11P31650 Gm12441-201ENSMUST00000121806 588 ntBASIC17.23■□□□□ 0.35
Slc6a11P31650 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a11P31650 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.23■□□□□ 0.35
Slc6a11P31650 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.23■□□□□ 0.35
Slc6a11P31650 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.23■□□□□ 0.35
Slc6a11P31650 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a11P31650 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a11P31650 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.23■□□□□ 0.35
Slc6a11P31650 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.23■□□□□ 0.35
Slc6a11P31650 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a11P31650 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Slc6a11P31650 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a11P31650 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a11P31650 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.22■□□□□ 0.35
Slc6a11P31650 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a11P31650 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Slc6a11P31650 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a11P31650 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.22■□□□□ 0.35
Slc6a11P31650 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a11P31650 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.22■□□□□ 0.35
Slc6a11P31650 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.22■□□□□ 0.35
Slc6a11P31650 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.22■□□□□ 0.35
Slc6a11P31650 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a11P31650 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Slc6a11P31650 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a11P31650 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a11P31650 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a11P31650 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a11P31650 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Slc6a11P31650 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a11P31650 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a11P31650 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a11P31650 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a11P31650 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a11P31650 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a11P31650 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Slc6a11P31650 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a11P31650 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Slc6a11P31650 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Slc6a11P31650 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Slc6a11P31650 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Slc6a11P31650 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Slc6a11P31650 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a11P31650 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a11P31650 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a11P31650 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a11P31650 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Slc6a11P31650 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a11P31650 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a11P31650 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a11P31650 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.2■□□□□ 0.34
Slc6a11P31650 Mir5133-201ENSMUST00000174955 77 ntBASIC17.2■□□□□ 0.34
Slc6a11P31650 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a11P31650 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a11P31650 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Slc6a11P31650 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a11P31650 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a11P31650 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a11P31650 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Slc6a11P31650 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Slc6a11P31650 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Slc6a11P31650 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a11P31650 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a11P31650 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a11P31650 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a11P31650 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a11P31650 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a11P31650 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a11P31650 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a11P31650 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Slc6a11P31650 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a11P31650 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a11P31650 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a11P31650 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a11P31650 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a11P31650 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a11P31650 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.19■□□□□ 0.34
Slc6a11P31650 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.19■□□□□ 0.34
Slc6a11P31650 Gm7514-201ENSMUST00000209475 934 ntBASIC17.19■□□□□ 0.34
Slc6a11P31650 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a11P31650 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a11P31650 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a11P31650 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a11P31650 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Slc6a11P31650 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms