Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a13P31649 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a13P31649 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a13P31649 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Slc6a13P31649 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
Slc6a13P31649 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Slc6a13P31649 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a13P31649 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a13P31649 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a13P31649 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a13P31649 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a13P31649 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a13P31649 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a13P31649 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Slc6a13P31649 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a13P31649 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.47■□□□□ 0.55
Slc6a13P31649 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.47■□□□□ 0.55
Slc6a13P31649 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.47■□□□□ 0.55
Slc6a13P31649 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.47■□□□□ 0.55
Slc6a13P31649 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a13P31649 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a13P31649 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a13P31649 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a13P31649 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Slc6a13P31649 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Slc6a13P31649 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a13P31649 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a13P31649 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.46■□□□□ 0.55
Slc6a13P31649 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a13P31649 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.46■□□□□ 0.55
Slc6a13P31649 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a13P31649 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Slc6a13P31649 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a13P31649 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Slc6a13P31649 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Slc6a13P31649 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Slc6a13P31649 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a13P31649 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a13P31649 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a13P31649 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Slc6a13P31649 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a13P31649 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.45■□□□□ 0.54
Slc6a13P31649 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a13P31649 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a13P31649 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a13P31649 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a13P31649 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a13P31649 Tgds-204ENSMUST00000228543 1594 ntBASIC18.45■□□□□ 0.54
Slc6a13P31649 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.45■□□□□ 0.54
Slc6a13P31649 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a13P31649 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a13P31649 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a13P31649 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.44■□□□□ 0.54
Slc6a13P31649 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a13P31649 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a13P31649 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a13P31649 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a13P31649 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a13P31649 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Slc6a13P31649 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a13P31649 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a13P31649 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a13P31649 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a13P31649 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a13P31649 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a13P31649 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a13P31649 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a13P31649 Grk6-206ENSMUST00000224995 2971 ntBASIC18.43■□□□□ 0.54
Slc6a13P31649 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a13P31649 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a13P31649 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.43■□□□□ 0.54
Slc6a13P31649 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a13P31649 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a13P31649 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Slc6a13P31649 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a13P31649 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc6a13P31649 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a13P31649 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a13P31649 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Slc6a13P31649 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a13P31649 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a13P31649 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a13P31649 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a13P31649 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a13P31649 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a13P31649 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a13P31649 Gm2399-201ENSMUST00000104944 225 ntBASIC18.42■□□□□ 0.54
Slc6a13P31649 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.42■□□□□ 0.54
Slc6a13P31649 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Slc6a13P31649 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a13P31649 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Slc6a13P31649 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a13P31649 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a13P31649 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a13P31649 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a13P31649 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a13P31649 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a13P31649 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a13P31649 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a13P31649 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms