Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PdgfbP31240 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PdgfbP31240 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PdgfbP31240 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PdgfbP31240 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PdgfbP31240 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.3■□□□□ 0.52
PdgfbP31240 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfbP31240 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PdgfbP31240 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfbP31240 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfbP31240 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfbP31240 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.3■□□□□ 0.52
PdgfbP31240 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.3■□□□□ 0.52
PdgfbP31240 Gm38027-201ENSMUST00000192315 235 ntBASIC18.3■□□□□ 0.52
PdgfbP31240 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfbP31240 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PdgfbP31240 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.3■□□□□ 0.52
PdgfbP31240 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PdgfbP31240 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PdgfbP31240 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PdgfbP31240 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PdgfbP31240 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.29■□□□□ 0.52
PdgfbP31240 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PdgfbP31240 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PdgfbP31240 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PdgfbP31240 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PdgfbP31240 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PdgfbP31240 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PdgfbP31240 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.29■□□□□ 0.52
PdgfbP31240 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PdgfbP31240 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PdgfbP31240 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.28■□□□□ 0.52
PdgfbP31240 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.28■□□□□ 0.52
PdgfbP31240 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PdgfbP31240 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.28■□□□□ 0.52
PdgfbP31240 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PdgfbP31240 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.28■□□□□ 0.52
PdgfbP31240 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PdgfbP31240 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PdgfbP31240 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PdgfbP31240 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PdgfbP31240 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PdgfbP31240 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PdgfbP31240 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PdgfbP31240 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PdgfbP31240 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.27■□□□□ 0.52
PdgfbP31240 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PdgfbP31240 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.27■□□□□ 0.52
PdgfbP31240 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.27■□□□□ 0.52
PdgfbP31240 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.27■□□□□ 0.52
PdgfbP31240 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PdgfbP31240 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.27■□□□□ 0.52
PdgfbP31240 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PdgfbP31240 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PdgfbP31240 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PdgfbP31240 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PdgfbP31240 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
PdgfbP31240 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PdgfbP31240 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PdgfbP31240 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfbP31240 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfbP31240 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PdgfbP31240 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfbP31240 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PdgfbP31240 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PdgfbP31240 Mir2861-201ENSMUST00000175539 82 ntBASIC18.26■□□□□ 0.51
PdgfbP31240 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfbP31240 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PdgfbP31240 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfbP31240 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfbP31240 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfbP31240 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfbP31240 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfbP31240 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PdgfbP31240 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.25■□□□□ 0.51
PdgfbP31240 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PdgfbP31240 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PdgfbP31240 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PdgfbP31240 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PdgfbP31240 Gm25016-201ENSMUST00000158399 131 ntBASIC18.25■□□□□ 0.51
PdgfbP31240 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.25■□□□□ 0.51
PdgfbP31240 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.25■□□□□ 0.51
PdgfbP31240 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.25■□□□□ 0.51
PdgfbP31240 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PdgfbP31240 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.25■□□□□ 0.51
PdgfbP31240 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PdgfbP31240 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PdgfbP31240 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PdgfbP31240 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PdgfbP31240 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
PdgfbP31240 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PdgfbP31240 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PdgfbP31240 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PdgfbP31240 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PdgfbP31240 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PdgfbP31240 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PdgfbP31240 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PdgfbP31240 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PdgfbP31240 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PdgfbP31240 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms