Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RxrbP28704 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RxrbP28704 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RxrbP28704 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RxrbP28704 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RxrbP28704 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RxrbP28704 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RxrbP28704 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RxrbP28704 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RxrbP28704 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.29■□□□□ 0.52
RxrbP28704 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RxrbP28704 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RxrbP28704 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RxrbP28704 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RxrbP28704 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RxrbP28704 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RxrbP28704 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RxrbP28704 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RxrbP28704 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RxrbP28704 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RxrbP28704 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RxrbP28704 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RxrbP28704 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RxrbP28704 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RxrbP28704 Gm27801-201ENSMUST00000184174 223 ntBASIC18.28■□□□□ 0.52
RxrbP28704 Gm43173-201ENSMUST00000202246 593 ntBASIC18.28■□□□□ 0.52
RxrbP28704 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RxrbP28704 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RxrbP28704 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RxrbP28704 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RxrbP28704 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RxrbP28704 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RxrbP28704 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RxrbP28704 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RxrbP28704 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RxrbP28704 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RxrbP28704 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RxrbP28704 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RxrbP28704 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RxrbP28704 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RxrbP28704 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RxrbP28704 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RxrbP28704 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RxrbP28704 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RxrbP28704 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RxrbP28704 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RxrbP28704 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RxrbP28704 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RxrbP28704 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RxrbP28704 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RxrbP28704 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RxrbP28704 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.26■□□□□ 0.51
RxrbP28704 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RxrbP28704 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RxrbP28704 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RxrbP28704 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RxrbP28704 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RxrbP28704 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RxrbP28704 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RxrbP28704 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RxrbP28704 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RxrbP28704 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RxrbP28704 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RxrbP28704 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RxrbP28704 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.25■□□□□ 0.51
RxrbP28704 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RxrbP28704 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RxrbP28704 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RxrbP28704 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RxrbP28704 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
RxrbP28704 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RxrbP28704 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RxrbP28704 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RxrbP28704 Haglr-201ENSMUST00000100000 2085 ntBASIC18.25■□□□□ 0.51
RxrbP28704 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
RxrbP28704 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RxrbP28704 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RxrbP28704 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.25■□□□□ 0.51
RxrbP28704 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RxrbP28704 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RxrbP28704 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RxrbP28704 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RxrbP28704 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.24■□□□□ 0.51
RxrbP28704 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.24■□□□□ 0.51
RxrbP28704 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.24■□□□□ 0.51
RxrbP28704 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.24■□□□□ 0.51
RxrbP28704 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RxrbP28704 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RxrbP28704 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RxrbP28704 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RxrbP28704 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RxrbP28704 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.23■□□□□ 0.51
RxrbP28704 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RxrbP28704 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RxrbP28704 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RxrbP28704 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.23■□□□□ 0.51
RxrbP28704 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RxrbP28704 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RxrbP28704 Gm27454-201ENSMUST00000185090 204 ntBASIC18.23■□□□□ 0.51
RxrbP28704 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms