Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nckap1P28660 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Nckap1P28660 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nckap1P28660 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nckap1P28660 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nckap1P28660 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Nckap1P28660 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nckap1P28660 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nckap1P28660 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.09■□□□□ 0.49
Nckap1P28660 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nckap1P28660 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nckap1P28660 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Nckap1P28660 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.09■□□□□ 0.49
Nckap1P28660 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.09■□□□□ 0.49
Nckap1P28660 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Nckap1P28660 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.09■□□□□ 0.49
Nckap1P28660 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nckap1P28660 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Nckap1P28660 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nckap1P28660 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Nckap1P28660 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nckap1P28660 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nckap1P28660 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nckap1P28660 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nckap1P28660 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nckap1P28660 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nckap1P28660 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nckap1P28660 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Nckap1P28660 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.08■□□□□ 0.48
Nckap1P28660 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nckap1P28660 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.08■□□□□ 0.48
Nckap1P28660 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nckap1P28660 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nckap1P28660 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.07■□□□□ 0.48
Nckap1P28660 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nckap1P28660 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Nckap1P28660 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nckap1P28660 Gm10138-203ENSMUST00000206952 366 ntBASIC18.07■□□□□ 0.48
Nckap1P28660 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nckap1P28660 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nckap1P28660 Mtag2-201ENSMUST00000058665 714 ntBASIC18.07■□□□□ 0.48
Nckap1P28660 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nckap1P28660 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nckap1P28660 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nckap1P28660 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nckap1P28660 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nckap1P28660 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nckap1P28660 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nckap1P28660 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nckap1P28660 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nckap1P28660 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nckap1P28660 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nckap1P28660 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nckap1P28660 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nckap1P28660 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Nckap1P28660 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nckap1P28660 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nckap1P28660 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nckap1P28660 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nckap1P28660 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.06■□□□□ 0.48
Nckap1P28660 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nckap1P28660 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nckap1P28660 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nckap1P28660 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.05■□□□□ 0.48
Nckap1P28660 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nckap1P28660 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nckap1P28660 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nckap1P28660 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nckap1P28660 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nckap1P28660 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.05■□□□□ 0.48
Nckap1P28660 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.05■□□□□ 0.48
Nckap1P28660 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.05■□□□□ 0.48
Nckap1P28660 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.05■□□□□ 0.48
Nckap1P28660 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nckap1P28660 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nckap1P28660 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nckap1P28660 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Nckap1P28660 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nckap1P28660 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nckap1P28660 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nckap1P28660 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nckap1P28660 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nckap1P28660 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nckap1P28660 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Nckap1P28660 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.04■□□□□ 0.48
Nckap1P28660 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nckap1P28660 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nckap1P28660 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nckap1P28660 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nckap1P28660 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nckap1P28660 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nckap1P28660 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nckap1P28660 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.04■□□□□ 0.48
Nckap1P28660 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Nckap1P28660 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.04■□□□□ 0.48
Nckap1P28660 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Nckap1P28660 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nckap1P28660 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nckap1P28660 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nckap1P28660 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms