Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.2■□□□□ 0.02
Col8a2P25318 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col8a2P25318 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col8a2P25318 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Col8a2P25318 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Col8a2P25318 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Col8a2P25318 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.2■□□□□ 0.02
Col8a2P25318 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.19■□□□□ 0.02
Col8a2P25318 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Gm10698-201ENSMUST00000182663 604 ntBASIC15.19■□□□□ 0.02
Col8a2P25318 Gm8520-201ENSMUST00000186517 868 ntBASIC15.19■□□□□ 0.02
Col8a2P25318 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.19■□□□□ 0.02
Col8a2P25318 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.19■□□□□ 0.02
Col8a2P25318 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col8a2P25318 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col8a2P25318 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col8a2P25318 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.18■□□□□ 0.02
Col8a2P25318 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col8a2P25318 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col8a2P25318 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col8a2P25318 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Col8a2P25318 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col8a2P25318 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col8a2P25318 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col8a2P25318 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.18■□□□□ 0.02
Col8a2P25318 Gm10252-201ENSMUST00000209541 832 ntBASIC15.18■□□□□ 0.02
Col8a2P25318 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.18■□□□□ 0.02
Col8a2P25318 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col8a2P25318 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col8a2P25318 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col8a2P25318 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col8a2P25318 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col8a2P25318 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col8a2P25318 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col8a2P25318 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col8a2P25318 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col8a2P25318 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col8a2P25318 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Col8a2P25318 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col8a2P25318 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col8a2P25318 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col8a2P25318 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col8a2P25318 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Col8a2P25318 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Col8a2P25318 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col8a2P25318 Gm22325-201ENSMUST00000158904 308 ntBASIC15.17■□□□□ 0.02
Col8a2P25318 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col8a2P25318 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col8a2P25318 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.17■□□□□ 0.02
Col8a2P25318 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
Col8a2P25318 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col8a2P25318 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col8a2P25318 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col8a2P25318 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.17■□□□□ 0.02
Col8a2P25318 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col8a2P25318 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col8a2P25318 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.17■□□□□ 0.02
Col8a2P25318 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.17■□□□□ 0.02
Col8a2P25318 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col8a2P25318 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Col8a2P25318 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col8a2P25318 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col8a2P25318 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col8a2P25318 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col8a2P25318 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Col8a2P25318 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col8a2P25318 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col8a2P25318 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Col8a2P25318 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.16■□□□□ 0.02
Col8a2P25318 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col8a2P25318 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col8a2P25318 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col8a2P25318 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.16■□□□□ 0.02
Col8a2P25318 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col8a2P25318 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col8a2P25318 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col8a2P25318 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Col8a2P25318 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.15■□□□□ 0.02
Col8a2P25318 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.15■□□□□ 0.02
Col8a2P25318 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col8a2P25318 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.15■□□□□ 0.02
Col8a2P25318 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col8a2P25318 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms