Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.4■□□□□ 0.38
BdnfP21237 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
BdnfP21237 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.4■□□□□ 0.38
BdnfP21237 Gm9988-201ENSMUST00000069786 435 ntBASIC17.4■□□□□ 0.38
BdnfP21237 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BdnfP21237 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
BdnfP21237 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BdnfP21237 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BdnfP21237 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BdnfP21237 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BdnfP21237 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BdnfP21237 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BdnfP21237 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BdnfP21237 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BdnfP21237 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BdnfP21237 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BdnfP21237 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
BdnfP21237 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.39■□□□□ 0.37
BdnfP21237 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BdnfP21237 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BdnfP21237 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.39■□□□□ 0.37
BdnfP21237 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BdnfP21237 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BdnfP21237 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
BdnfP21237 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.39■□□□□ 0.37
BdnfP21237 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
BdnfP21237 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
BdnfP21237 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BdnfP21237 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BdnfP21237 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.39■□□□□ 0.37
BdnfP21237 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BdnfP21237 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BdnfP21237 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BdnfP21237 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BdnfP21237 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BdnfP21237 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BdnfP21237 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.38■□□□□ 0.37
BdnfP21237 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.38■□□□□ 0.37
BdnfP21237 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
BdnfP21237 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BdnfP21237 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
BdnfP21237 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BdnfP21237 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BdnfP21237 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BdnfP21237 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BdnfP21237 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
BdnfP21237 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BdnfP21237 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BdnfP21237 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.37■□□□□ 0.37
BdnfP21237 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BdnfP21237 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
BdnfP21237 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BdnfP21237 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BdnfP21237 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
BdnfP21237 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.37■□□□□ 0.37
BdnfP21237 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BdnfP21237 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.37■□□□□ 0.37
BdnfP21237 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BdnfP21237 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
BdnfP21237 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BdnfP21237 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.37■□□□□ 0.37
BdnfP21237 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BdnfP21237 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BdnfP21237 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
BdnfP21237 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BdnfP21237 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BdnfP21237 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
BdnfP21237 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BdnfP21237 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
BdnfP21237 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
BdnfP21237 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BdnfP21237 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BdnfP21237 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BdnfP21237 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BdnfP21237 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
BdnfP21237 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BdnfP21237 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
BdnfP21237 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BdnfP21237 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BdnfP21237 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BdnfP21237 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BdnfP21237 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.35■□□□□ 0.37
BdnfP21237 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.35■□□□□ 0.37
BdnfP21237 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.35■□□□□ 0.37
BdnfP21237 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BdnfP21237 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BdnfP21237 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.35■□□□□ 0.37
BdnfP21237 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BdnfP21237 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
BdnfP21237 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.35■□□□□ 0.37
BdnfP21237 Reep4-203ENSMUST00000226563 1444 ntBASIC17.35■□□□□ 0.37
BdnfP21237 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
BdnfP21237 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BdnfP21237 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BdnfP21237 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BdnfP21237 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BdnfP21237 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BdnfP21237 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BdnfP21237 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BdnfP21237 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms