Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Chmp6P0C0A3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp6P0C0A3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp6P0C0A3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp6P0C0A3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp6P0C0A3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp6P0C0A3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp6P0C0A3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp6P0C0A3 Gm6211-202ENSMUST00000167849 925 ntBASIC19.78■□□□□ 0.76
Chmp6P0C0A3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Chmp6P0C0A3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp6P0C0A3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp6P0C0A3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp6P0C0A3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp6P0C0A3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp6P0C0A3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp6P0C0A3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp6P0C0A3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp6P0C0A3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Chmp6P0C0A3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.77■□□□□ 0.76
Chmp6P0C0A3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp6P0C0A3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.77■□□□□ 0.76
Chmp6P0C0A3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp6P0C0A3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.77■□□□□ 0.76
Chmp6P0C0A3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.77■□□□□ 0.76
Chmp6P0C0A3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.77■□□□□ 0.76
Chmp6P0C0A3 Grk6-206ENSMUST00000224995 2971 ntBASIC19.77■□□□□ 0.76
Chmp6P0C0A3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp6P0C0A3 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.77■□□□□ 0.76
Chmp6P0C0A3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Chmp6P0C0A3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp6P0C0A3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chmp6P0C0A3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp6P0C0A3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp6P0C0A3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp6P0C0A3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp6P0C0A3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp6P0C0A3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp6P0C0A3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp6P0C0A3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Chmp6P0C0A3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.76■□□□□ 0.75
Chmp6P0C0A3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp6P0C0A3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp6P0C0A3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp6P0C0A3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp6P0C0A3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp6P0C0A3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp6P0C0A3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.75■□□□□ 0.75
Chmp6P0C0A3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp6P0C0A3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp6P0C0A3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp6P0C0A3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Chmp6P0C0A3 Gm13148-201ENSMUST00000118892 745 ntBASIC19.75■□□□□ 0.75
Chmp6P0C0A3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.75■□□□□ 0.75
Chmp6P0C0A3 Gm5408-201ENSMUST00000197998 747 ntBASIC19.75■□□□□ 0.75
Chmp6P0C0A3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp6P0C0A3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Chmp6P0C0A3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp6P0C0A3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp6P0C0A3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp6P0C0A3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp6P0C0A3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp6P0C0A3 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.74■□□□□ 0.75
Chmp6P0C0A3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp6P0C0A3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp6P0C0A3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp6P0C0A3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.74■□□□□ 0.75
Chmp6P0C0A3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Chmp6P0C0A3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp6P0C0A3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp6P0C0A3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.74■□□□□ 0.75
Chmp6P0C0A3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp6P0C0A3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp6P0C0A3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.74■□□□□ 0.75
Chmp6P0C0A3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp6P0C0A3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp6P0C0A3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp6P0C0A3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.74■□□□□ 0.75
Chmp6P0C0A3 BC021767-201ENSMUST00000126387 1716 ntBASIC19.73■□□□□ 0.75
Chmp6P0C0A3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.73■□□□□ 0.75
Chmp6P0C0A3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp6P0C0A3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp6P0C0A3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp6P0C0A3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp6P0C0A3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp6P0C0A3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp6P0C0A3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Chmp6P0C0A3 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.73■□□□□ 0.75
Chmp6P0C0A3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Chmp6P0C0A3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.73■□□□□ 0.75
Chmp6P0C0A3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp6P0C0A3 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.73■□□□□ 0.75
Chmp6P0C0A3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp6P0C0A3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp6P0C0A3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp6P0C0A3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp6P0C0A3 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.73■□□□□ 0.75
Chmp6P0C0A3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp6P0C0A3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp6P0C0A3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms