Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rc3h2P0C090 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h2P0C090 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h2P0C090 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h2P0C090 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h2P0C090 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h2P0C090 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.49■□□□□ 0.55
Rc3h2P0C090 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h2P0C090 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rc3h2P0C090 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rc3h2P0C090 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rc3h2P0C090 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rc3h2P0C090 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.48■□□□□ 0.55
Rc3h2P0C090 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.48■□□□□ 0.55
Rc3h2P0C090 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rc3h2P0C090 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rc3h2P0C090 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rc3h2P0C090 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rc3h2P0C090 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rc3h2P0C090 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h2P0C090 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h2P0C090 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h2P0C090 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.47■□□□□ 0.55
Rc3h2P0C090 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.47■□□□□ 0.55
Rc3h2P0C090 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rc3h2P0C090 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h2P0C090 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Rc3h2P0C090 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h2P0C090 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.47■□□□□ 0.55
Rc3h2P0C090 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h2P0C090 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h2P0C090 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h2P0C090 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.47■□□□□ 0.55
Rc3h2P0C090 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h2P0C090 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h2P0C090 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rc3h2P0C090 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Rc3h2P0C090 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h2P0C090 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h2P0C090 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h2P0C090 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rc3h2P0C090 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.46■□□□□ 0.55
Rc3h2P0C090 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.46■□□□□ 0.55
Rc3h2P0C090 Gm15375-201ENSMUST00000119510 849 ntBASIC18.46■□□□□ 0.55
Rc3h2P0C090 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.46■□□□□ 0.55
Rc3h2P0C090 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.46■□□□□ 0.55
Rc3h2P0C090 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rc3h2P0C090 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.46■□□□□ 0.55
Rc3h2P0C090 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rc3h2P0C090 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Gm43183-201ENSMUST00000200632 547 ntBASIC18.45■□□□□ 0.54
Rc3h2P0C090 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rc3h2P0C090 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.45■□□□□ 0.54
Rc3h2P0C090 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rc3h2P0C090 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h2P0C090 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rc3h2P0C090 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.44■□□□□ 0.54
Rc3h2P0C090 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.44■□□□□ 0.54
Rc3h2P0C090 Gm37055-201ENSMUST00000191866 133 ntBASIC18.44■□□□□ 0.54
Rc3h2P0C090 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h2P0C090 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h2P0C090 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.44■□□□□ 0.54
Rc3h2P0C090 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h2P0C090 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Rc3h2P0C090 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h2P0C090 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rc3h2P0C090 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rc3h2P0C090 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
Rc3h2P0C090 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.43■□□□□ 0.54
Rc3h2P0C090 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h2P0C090 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Rc3h2P0C090 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h2P0C090 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h2P0C090 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.43■□□□□ 0.54
Rc3h2P0C090 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h2P0C090 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rc3h2P0C090 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.43■□□□□ 0.54
Rc3h2P0C090 Gm18025-201ENSMUST00000221733 862 ntBASIC18.43■□□□□ 0.54
Rc3h2P0C090 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h2P0C090 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h2P0C090 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h2P0C090 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rc3h2P0C090 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms