Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
P06328 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.34□□□□□ -0.27
P06328 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
P06328 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.34□□□□□ -0.27
P06328 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06328 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06328 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
P06328 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
P06328 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06328 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06328 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06328 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
P06328 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06328 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06328 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06328 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06328 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.33□□□□□ -0.28
P06328 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.33□□□□□ -0.28
P06328 Reep4-203ENSMUST00000226563 1444 ntBASIC13.33□□□□□ -0.28
P06328 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06328 Gm13146-201ENSMUST00000118508 780 ntBASIC13.33□□□□□ -0.28
P06328 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P06328 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.33□□□□□ -0.28
P06328 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06328 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06328 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.33□□□□□ -0.28
P06328 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06328 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06328 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
P06328 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06328 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06328 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06328 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06328 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P06328 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06328 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06328 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06328 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06328 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06328 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06328 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06328 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.32□□□□□ -0.28
P06328 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
P06328 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.32□□□□□ -0.28
P06328 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.32□□□□□ -0.28
P06328 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06328 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P06328 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06328 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06328 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06328 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06328 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P06328 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06328 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06328 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06328 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06328 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06328 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
P06328 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.31□□□□□ -0.28
P06328 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
P06328 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06328 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.3□□□□□ -0.28
P06328 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06328 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06328 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
P06328 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
P06328 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P06328 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06328 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06328 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.3□□□□□ -0.28
P06328 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06328 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P06328 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
P06328 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P06328 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P06328 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06328 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06328 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06328 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06328 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06328 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.3□□□□□ -0.28
P06328 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P06328 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06328 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06328 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P06328 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06328 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06328 Gm13534-201ENSMUST00000121169 513 ntBASIC13.29□□□□□ -0.28
P06328 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC13.29□□□□□ -0.28
P06328 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06328 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06328 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06328 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P06328 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06328 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
P06328 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06328 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P06328 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06328 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06328 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms