Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.25■□□□□ 0.03
Cd74P04441 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.25■□□□□ 0.03
Cd74P04441 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd74P04441 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd74P04441 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.25■□□□□ 0.03
Cd74P04441 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
Cd74P04441 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd74P04441 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd74P04441 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd74P04441 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd74P04441 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd74P04441 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd74P04441 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cd74P04441 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd74P04441 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd74P04441 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cd74P04441 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd74P04441 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd74P04441 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cd74P04441 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd74P04441 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd74P04441 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd74P04441 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.24■□□□□ 0.03
Cd74P04441 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.24■□□□□ 0.03
Cd74P04441 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.24■□□□□ 0.03
Cd74P04441 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd74P04441 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd74P04441 Gm6365-201ENSMUST00000054711 744 ntBASIC15.24■□□□□ 0.03
Cd74P04441 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cd74P04441 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.24■□□□□ 0.03
Cd74P04441 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd74P04441 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd74P04441 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd74P04441 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Cd74P04441 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd74P04441 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.23■□□□□ 0.03
Cd74P04441 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cd74P04441 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd74P04441 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd74P04441 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Cd74P04441 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cd74P04441 Gm13534-201ENSMUST00000121169 513 ntBASIC15.23■□□□□ 0.03
Cd74P04441 Gm12441-201ENSMUST00000121806 588 ntBASIC15.23■□□□□ 0.03
Cd74P04441 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cd74P04441 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cd74P04441 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.23■□□□□ 0.03
Cd74P04441 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cd74P04441 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd74P04441 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cd74P04441 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cd74P04441 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd74P04441 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd74P04441 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.23■□□□□ 0.03
Cd74P04441 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.23■□□□□ 0.03
Cd74P04441 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd74P04441 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cd74P04441 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd74P04441 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd74P04441 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd74P04441 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cd74P04441 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd74P04441 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd74P04441 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.22■□□□□ 0.03
Cd74P04441 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cd74P04441 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.22■□□□□ 0.03
Cd74P04441 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Cd74P04441 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd74P04441 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cd74P04441 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd74P04441 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Cd74P04441 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.22■□□□□ 0.03
Cd74P04441 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd74P04441 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.22■□□□□ 0.03
Cd74P04441 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd74P04441 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd74P04441 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Cd74P04441 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd74P04441 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd74P04441 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.21■□□□□ 0.03
Cd74P04441 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd74P04441 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cd74P04441 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.21■□□□□ 0.03
Cd74P04441 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cd74P04441 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.21■□□□□ 0.03
Cd74P04441 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Cd74P04441 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cd74P04441 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cd74P04441 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Cd74P04441 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd74P04441 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd74P04441 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd74P04441 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cd74P04441 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cd74P04441 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.21■□□□□ 0.02
Cd74P04441 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cd74P04441 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cd74P04441 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd74P04441 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd74P04441 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd74P04441 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms