Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04213 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
P04213 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04213 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04213 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04213 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04213 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
P04213 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
P04213 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
P04213 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
P04213 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
P04213 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
P04213 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.45■□□□□ 0.38
P04213 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04213 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
P04213 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04213 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
P04213 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
P04213 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
P04213 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04213 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04213 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.44■□□□□ 0.38
P04213 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
P04213 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
P04213 Gm18284-201ENSMUST00000172604 624 ntBASIC17.44■□□□□ 0.38
P04213 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.44■□□□□ 0.38
P04213 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04213 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
P04213 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04213 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
P04213 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.44■□□□□ 0.38
P04213 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04213 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
P04213 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04213 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04213 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04213 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04213 Gm10849-201ENSMUST00000100397 618 ntBASIC17.43■□□□□ 0.38
P04213 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P04213 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04213 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04213 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P04213 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
P04213 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P04213 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04213 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04213 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04213 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04213 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04213 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
P04213 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P04213 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04213 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04213 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
P04213 Gm22325-201ENSMUST00000158904 308 ntBASIC17.42■□□□□ 0.38
P04213 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.42■□□□□ 0.38
P04213 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.42■□□□□ 0.38
P04213 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.42■□□□□ 0.38
P04213 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04213 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04213 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
P04213 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P04213 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
P04213 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04213 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04213 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04213 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04213 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
P04213 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04213 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.41■□□□□ 0.38
P04213 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P04213 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.41■□□□□ 0.38
P04213 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04213 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P04213 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
P04213 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04213 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
P04213 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04213 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04213 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04213 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04213 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.4■□□□□ 0.38
P04213 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04213 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.4■□□□□ 0.38
P04213 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.4■□□□□ 0.38
P04213 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
P04213 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
P04213 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04213 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04213 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04213 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04213 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.4■□□□□ 0.38
P04213 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04213 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04213 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04213 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
P04213 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
P04213 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04213 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.39■□□□□ 0.37
P04213 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms