Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col4a1P02463 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col4a1P02463 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col4a1P02463 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.21
Col4a1P02463 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col4a1P02463 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col4a1P02463 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col4a1P02463 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col4a1P02463 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Col4a1P02463 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Col4a1P02463 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col4a1P02463 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col4a1P02463 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col4a1P02463 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC22.57■■□□□ 1.2
Col4a1P02463 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC22.57■■□□□ 1.2
Col4a1P02463 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col4a1P02463 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Col4a1P02463 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col4a1P02463 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col4a1P02463 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC22.56■■□□□ 1.2
Col4a1P02463 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Col4a1P02463 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col4a1P02463 Gm12085-201ENSMUST00000119263 940 ntBASIC22.56■■□□□ 1.2
Col4a1P02463 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC22.56■■□□□ 1.2
Col4a1P02463 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col4a1P02463 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Col4a1P02463 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Col4a1P02463 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col4a1P02463 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Col4a1P02463 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col4a1P02463 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Col4a1P02463 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC22.55■■□□□ 1.2
Col4a1P02463 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Col4a1P02463 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC22.55■■□□□ 1.2
Col4a1P02463 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col4a1P02463 Gm37820-201ENSMUST00000194021 2147 ntBASIC22.55■■□□□ 1.2
Col4a1P02463 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col4a1P02463 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col4a1P02463 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col4a1P02463 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
Col4a1P02463 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC22.55■■□□□ 1.2
Col4a1P02463 Gm6659-201ENSMUST00000174752 547 ntBASIC22.55■■□□□ 1.2
Col4a1P02463 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Col4a1P02463 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col4a1P02463 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Col4a1P02463 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col4a1P02463 Gm42922-201ENSMUST00000195887 2078 ntBASIC22.54■■□□□ 1.2
Col4a1P02463 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col4a1P02463 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
Col4a1P02463 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col4a1P02463 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col4a1P02463 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col4a1P02463 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col4a1P02463 BC021767-201ENSMUST00000126387 1716 ntBASIC22.53■■□□□ 1.2
Col4a1P02463 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col4a1P02463 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Col4a1P02463 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC22.53■■□□□ 1.2
Col4a1P02463 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Col4a1P02463 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Col4a1P02463 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col4a1P02463 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col4a1P02463 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
Col4a1P02463 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col4a1P02463 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Col4a1P02463 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC22.52■■□□□ 1.2
Col4a1P02463 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col4a1P02463 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col4a1P02463 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Col4a1P02463 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC22.52■■□□□ 1.2
Col4a1P02463 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col4a1P02463 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col4a1P02463 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Col4a1P02463 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC22.52■■□□□ 1.2
Col4a1P02463 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col4a1P02463 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col4a1P02463 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
Col4a1P02463 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC22.51■■□□□ 1.19
Col4a1P02463 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC22.51■■□□□ 1.19
Col4a1P02463 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col4a1P02463 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Col4a1P02463 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col4a1P02463 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col4a1P02463 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col4a1P02463 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col4a1P02463 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC22.5■■□□□ 1.19
Col4a1P02463 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col4a1P02463 Gm4217-201ENSMUST00000182243 1002 ntBASIC22.5■■□□□ 1.19
Col4a1P02463 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC22.5■■□□□ 1.19
Col4a1P02463 Gm18032-201ENSMUST00000222541 538 ntBASIC22.5■■□□□ 1.19
Col4a1P02463 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col4a1P02463 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col4a1P02463 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col4a1P02463 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Col4a1P02463 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC22.5■■□□□ 1.19
Col4a1P02463 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col4a1P02463 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC22.49■■□□□ 1.19
Col4a1P02463 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Col4a1P02463 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col4a1P02463 Gm5784-201ENSMUST00000179344 2478 ntBASIC22.49■■□□□ 1.19
Col4a1P02463 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms