Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01852 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01852 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01852 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
P01852 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.61■□□□□ 0.25
P01852 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
P01852 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.61■□□□□ 0.25
P01852 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.61■□□□□ 0.25
P01852 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01852 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
P01852 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01852 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01852 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01852 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01852 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P01852 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P01852 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P01852 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
P01852 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.6■□□□□ 0.25
P01852 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
P01852 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P01852 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
P01852 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
P01852 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P01852 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
P01852 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P01852 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P01852 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
P01852 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P01852 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P01852 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P01852 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
P01852 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
P01852 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
P01852 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P01852 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P01852 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P01852 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
P01852 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
P01852 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
P01852 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.58■□□□□ 0.24
P01852 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.58■□□□□ 0.24
P01852 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.58■□□□□ 0.24
P01852 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.58■□□□□ 0.24
P01852 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.58■□□□□ 0.24
P01852 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P01852 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P01852 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
P01852 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
P01852 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P01852 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P01852 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P01852 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
P01852 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P01852 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P01852 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P01852 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
P01852 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P01852 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
P01852 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.57■□□□□ 0.24
P01852 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.57■□□□□ 0.24
P01852 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.57■□□□□ 0.24
P01852 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
P01852 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
P01852 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.57■□□□□ 0.24
P01852 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
P01852 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P01852 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.57■□□□□ 0.24
P01852 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.57■□□□□ 0.24
P01852 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
P01852 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P01852 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P01852 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P01852 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P01852 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P01852 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P01852 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
P01852 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P01852 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01852 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P01852 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.56■□□□□ 0.24
P01852 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01852 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.56■□□□□ 0.24
P01852 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
P01852 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01852 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
P01852 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.56■□□□□ 0.24
P01852 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01852 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
P01852 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01852 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01852 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01852 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01852 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01852 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01852 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.56■□□□□ 0.24
P01852 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P01852 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
P01852 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P01852 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms