Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igh-VJ558P01758 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igh-VJ558P01758 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igh-VJ558P01758 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igh-VJ558P01758 Gm7291-201ENSMUST00000199147 382 ntBASIC15.76■□□□□ 0.11
Igh-VJ558P01758 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.76■□□□□ 0.11
Igh-VJ558P01758 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Igh-VJ558P01758 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igh-VJ558P01758 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Igh-VJ558P01758 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
Igh-VJ558P01758 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.76■□□□□ 0.11
Igh-VJ558P01758 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igh-VJ558P01758 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Igh-VJ558P01758 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igh-VJ558P01758 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igh-VJ558P01758 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Igh-VJ558P01758 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igh-VJ558P01758 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Igh-VJ558P01758 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.75■□□□□ 0.11
Igh-VJ558P01758 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Igh-VJ558P01758 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Igh-VJ558P01758 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Igh-VJ558P01758 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igh-VJ558P01758 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igh-VJ558P01758 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igh-VJ558P01758 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igh-VJ558P01758 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igh-VJ558P01758 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igh-VJ558P01758 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.74■□□□□ 0.11
Igh-VJ558P01758 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igh-VJ558P01758 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Igh-VJ558P01758 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Igh-VJ558P01758 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igh-VJ558P01758 Gm6211-202ENSMUST00000167849 925 ntBASIC15.74■□□□□ 0.11
Igh-VJ558P01758 Gm27405-201ENSMUST00000184201 112 ntBASIC15.74■□□□□ 0.11
Igh-VJ558P01758 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igh-VJ558P01758 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igh-VJ558P01758 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igh-VJ558P01758 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.73■□□□□ 0.11
Igh-VJ558P01758 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Igh-VJ558P01758 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igh-VJ558P01758 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Igh-VJ558P01758 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igh-VJ558P01758 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igh-VJ558P01758 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igh-VJ558P01758 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igh-VJ558P01758 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Igh-VJ558P01758 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Igh-VJ558P01758 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igh-VJ558P01758 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Igh-VJ558P01758 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igh-VJ558P01758 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igh-VJ558P01758 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igh-VJ558P01758 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igh-VJ558P01758 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igh-VJ558P01758 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igh-VJ558P01758 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igh-VJ558P01758 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Igh-VJ558P01758 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igh-VJ558P01758 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igh-VJ558P01758 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igh-VJ558P01758 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igh-VJ558P01758 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igh-VJ558P01758 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Igh-VJ558P01758 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Igh-VJ558P01758 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.71■□□□□ 0.1
Igh-VJ558P01758 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Igh-VJ558P01758 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igh-VJ558P01758 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igh-VJ558P01758 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igh-VJ558P01758 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igh-VJ558P01758 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igh-VJ558P01758 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Igh-VJ558P01758 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Igh-VJ558P01758 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.7■□□□□ 0.1
Igh-VJ558P01758 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Igh-VJ558P01758 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.7■□□□□ 0.1
Igh-VJ558P01758 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Igh-VJ558P01758 Gm13148-201ENSMUST00000118892 745 ntBASIC15.7■□□□□ 0.1
Igh-VJ558P01758 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Igh-VJ558P01758 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms